| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1089 |
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| Symbol | |
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| ID | 4460528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1345768 |
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| End bp | 1347525 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639701853 |
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| Product | TIR protein |
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| Protein accession | YP_845217 |
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| Protein GI | 116748530 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0814211 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCGCT CATCCATCTT CATCAGTTAC AGTCACAAGG ACAGGGAATG GCTCTCCCGA
CTTTCGGCTC ACCTCGGCGT GCTCGAGCAG GAAGGCGACG TGGGAGCCTG GAGCGACGAG
AACCTGAGGC CGGGGGACGA CTGGCCGCGC GAAATCCGCG AGGCCATGGA CAGCGCGAAG
ATCGCAGTGC TTCTCGTGTC CGCGAACTTC ACGAGCTCGA AATTCATCAT GCAGAAGGAA
GTGCCTGTCC TGATCGACCG ATGGCGTAGC GGCAGCCTGA AGATCCTCCC GCTGATCGTG
ACCCCGTGCC CTTACGGGCA GAGCATCCTG CGCGAGGTCG AACCCCGGCC CAAGCACCGG
GATTCCGTGG CGGACGGAAG CCCGGCGGAC CAGGAAAGGG ACCTCCGCGA CCTCACCGTC
GAGATCGCCA ATCTTCTTGT GCCGGAGGCG CCGCAGCCCC CCGGCGGCAG GAAACCCGTC
ACGGCTCCGC CCGGGCAGAG GGTCGTCACG CGGCCGGCGG CCCGGCATGA CGCCTACGCG
CTGCTCGACG TCAGGCTGAG CCACCGGGAG TGGGACCGGT ACTGCGTGGA GCTCGGCTTC
ACCCACTCCG GCGATTCCGC CCCTCCCCTC CCCCTGACCC ACTTCGTCTC CTTCGACCTG
CCGAAACTCA TCGGAACCCG GGACAATCTG GAGTACGCGC GCCGGCTCCG CAATCTCCTG
TTCGCCGAAC CGTCGCACAG GGATTTTCTT CGAACGGCGC AAGACTCCGC CGCGGAGCTC
CGGGTGCCGC TGCAGCTGCG GATGTCGATC TCCGCCTGTG CCCGCGAGCT GCACTGGCTG
CGGTGGGAGC TCCTGATCCA GGGGGGATCG GGGGAAAACG ATCTCTCCTT CGAATCCACA
TGCCTCGCGC GCTACGCGGC CGCGGATGCC CGCAGCTGGC GCGACATTCA GCACAGGCCG
AAACGGCCCC TGCGCGCCTT GCTCGTCGCG GGATTGACGG ACTGGTTCAA GCCTTCGGTC
CGGTCCACCG ATGCCGGGGA CCCGGGAATC GAAAAGTGCG CGCGGGCCGA AAGCATCCTG
GAAGCGTCCG GGCTGGCGAC CGCACACACA CTGGGATACC TGAACGGCGA CGCCTTCCGG
AGCGAGCTCA GGGCGACCGC GCCCGACATC CTTTACCTGT GCGTCGACCT TCCCCAAACC
GATGAATCCA TCGAGCTGGG AACCGTGGGC GTGGAGTGGT GGGCGTCACG GCTCGTGAAT
CTGCCGATTG CGGAGGCGTT CCGGGACATC GAAACGCCGC CGCGGATGGT GATCCTGTGC
CCCGTTGTCC GCGGTAGGCG TCCCGAGGCG GCGGAATCGC ATTCCACGTG GTTTTCCATC
CTGCGTGAAG CTTATGAGCT GGCCCAATCC GGAGTCCTCG GCGTTCTCAC GCTCCAGGCG
GTCCTCGATG ATTCCACGTG GGACGCGTTT TTCAAGGCGT TCCTCGACAA CCTCGCTCCA
AACGGGCGAA TGGACCACGC TCTCCACGCG GCTCGCGCGG CGCTCAAGAC TTCCGGTCGA
CCGTGGGCTC CGGTGTTGAT CTCCTGCCTG CGCACTCCGC GCATATGGTA CGAACCCCGG
TTCACCGAGG GTACTCCGGT GGACAAGACC TGGGACACCC TCCTGCTCAA GATCAGGAAC
GGCGAATGCA CACCCATGAT CGGCCCGGGG CTCAACAGCA CCATCGCCAG GCTCCGCACG
GAGATCGCGC TGGCCTAG
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| Protein sequence | MARSSIFISY SHKDREWLSR LSAHLGVLEQ EGDVGAWSDE NLRPGDDWPR EIREAMDSAK
IAVLLVSANF TSSKFIMQKE VPVLIDRWRS GSLKILPLIV TPCPYGQSIL REVEPRPKHR
DSVADGSPAD QERDLRDLTV EIANLLVPEA PQPPGGRKPV TAPPGQRVVT RPAARHDAYA
LLDVRLSHRE WDRYCVELGF THSGDSAPPL PLTHFVSFDL PKLIGTRDNL EYARRLRNLL
FAEPSHRDFL RTAQDSAAEL RVPLQLRMSI SACARELHWL RWELLIQGGS GENDLSFEST
CLARYAAADA RSWRDIQHRP KRPLRALLVA GLTDWFKPSV RSTDAGDPGI EKCARAESIL
EASGLATAHT LGYLNGDAFR SELRATAPDI LYLCVDLPQT DESIELGTVG VEWWASRLVN
LPIAEAFRDI ETPPRMVILC PVVRGRRPEA AESHSTWFSI LREAYELAQS GVLGVLTLQA
VLDDSTWDAF FKAFLDNLAP NGRMDHALHA ARAALKTSGR PWAPVLISCL RTPRIWYEPR
FTEGTPVDKT WDTLLLKIRN GECTPMIGPG LNSTIARLRT EIALA
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