Gene Sfum_1079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1079 
Symbol 
ID4460844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1333497 
End bp1334222 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content60% 
IMG OID639701844 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_845208 
Protein GI116748521 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCGC TTATTGAGGC CGACGGAATC GTTGAGCAAG TCCTGAACGT TGTAGCACCC 
GGGCAGCCCG TTTCGAGAAG GAGGGTGTTG AAGCTTTGCG GGGCCACGAT CGCCGGGATG
GCTTCGTGGC ACTTCTTTGG AATGGGCGGC GGAATCAGTG CTCCGCTGAT CATCACGGAA
CAGGCCGGCG GACTGGTGGT CGCCGATCCC ACGAGATGTG TCGGCTGCCG CAGATGCGAA
CTTGCCTGCA CCGAGTTCAA CGACGGAAAA TCATCCCCCG GGACAGCCCG GATAAAGGTG
AGGCGAAATT TGAATTTCGG CCCCGCGGGG CTCTACACCG GGCAATGCAC CGACGGGAAC
TGGGGAAGCG GCCTGATCGT TCAGGACTTT TGCAAGCAGT GTCCCCATCC CGTTCCCTGT
GCCGACGCCT GTCCCAATGC AGCCATCGAA GTGAAACCGC CCGTGAACGC CAGGGTCGTC
AACCCGGACA GGTGCACCGG CTGCAAAGTA TGCCTGAAAG CCTGTCCGTG GGAGATGATG
TCGTTCGATC CGGAAACAAA CAAGGCCACC AAGTGTTTTC TGTGCGAAGG CAAGCCGAAA
TGCGTGGAGG CATGTCCGGC GGAGGCGCTG ACGTACGTGT CCTGGGTTGA CCTGACCGGC
AAGGTCCCGT CCCGGACGAC TCCCGTTTCG AATCGATCCG TGGCATGCAT CGATTGCCAC
AAGTGA
 
Protein sequence
MKALIEADGI VEQVLNVVAP GQPVSRRRVL KLCGATIAGM ASWHFFGMGG GISAPLIITE 
QAGGLVVADP TRCVGCRRCE LACTEFNDGK SSPGTARIKV RRNLNFGPAG LYTGQCTDGN
WGSGLIVQDF CKQCPHPVPC ADACPNAAIE VKPPVNARVV NPDRCTGCKV CLKACPWEMM
SFDPETNKAT KCFLCEGKPK CVEACPAEAL TYVSWVDLTG KVPSRTTPVS NRSVACIDCH
K