| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1077 |
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| Symbol | |
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| ID | 4460842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1330025 |
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| End bp | 1331515 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639701842 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_845206 |
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| Protein GI | 116748519 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.512437 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGTT TCGCCCTCAC GGCCCTTGCC GTCCTCCTTG CCGGCTGTAC GCTCGGTCCC
GACTATCGCC GCCCCGCCGT GGACGTCATG CCGTCCTACC GCTTCGAAGA GCGGGAAACG
CGCGACACGG CCAACACCGA CTGGTGGAAG GAGTTCCAGG ACCCGGTGCT GGATTCGCTC
ATTGCCGAAG CGCTTGCCAA CAACAGGAAC GTCAGGATCG CCGCCGCCAA CATCGATCAG
GCGGCCGGAG TGCTGATGCA GACCCGCGCT CCGCTCTTTC CCCAGGTGAG CTACAGCGGG
AGCGCAACGC GGCGGCGAGC GAGCGAACGC GGTTCCGACG TCCTGTCCGG CTTTGTTTCC
AACCCTCGGA ACTCCTTCGA GCTGCTGGCC GGGGCCAACT GGGAGATCGA TCTGTGGGGA
CGCATCCGAA GGCTGTCCGA GGCCGCGCGG GCGAACCTGC TGGCGAGCGA GGAAGCCCGT
CGCGGGGTGG TGCTCTCCCT GGTGGCCTCC GTTGCGGGCA CATACATTCA GCTTCGCGGA
CTCGACGACC AACTCGAGAT TTCACGGCGC ACGCTCGCCG TTTACGGGGA GTCGCTCCGG
CTGTTCGAGC TGCAGTTCGC CCATGGGCAG GTCTCGCAAA TGACCGTGGA GCAGGCCCGT
TCGCAGTACG AGACGGCGGC GGCCACGATC CCGCAGATCG AGTCGCAGAT CGCTCAGACC
GAAAACGGTC TGTCCACCCT GCTCGGCCGA AACCCCGGCC CCGTCGATCG GGGGAAATCC
ATTCGCGAGT TGACACCGCC GGCTATCCCT TCGGGACTCC CGTCGCAGCT GCTGGAGCGC
CGCCCCGACC TGGCGCAGGC CGAGCAGAAC CTCATTGCCG CCAACGCTCA AATTGGAGCG
GCCAAGGCTC TCTACTTTCC CGCCATCTCG CTCACCGCCG CCCTAGGCAC CCAGAGCTCC
GAGCTCTCCG ATCTTTTCAA GGGACCCGCA AGAACCTGGA GTTACGCGGG GTCTTTCACG
GGACCGATTT TCACGGCCGG GGCCATCGCC GGACAGGTGA AGCAGGCCGA AGCCATGCAA
AAGGCGGCTC TTGAGAGCTA TCAAAATGCG ATTTTGAACG CATTCAGCGA TGTCGAAAGT
GCACTCGTCG CGCGCCGGAA GCTCTCGGAA CAACTGGAGG CCCAGGAGGC GCTCGTGAGG
ACGCTCAAGG AATACGACCG CCTGGCCTGG CTGCAGTACA ACGGGGGATA CACGCCTTAC
CTCACGGTAC TCACCGCCGA GACGCAGCTT TTCCCCGCGG AGCTCACCAC CTCCGAGGTG
AGGACCGCCT TGATGGCGGC GTATGTGAAT ATTTACAAAG TCATGGGAGG AGGCTGGGTG
AACAGGGCGG ATGCGCTTAC CCGGGAAGCC CCCGCGGCCG CGCCTTTGGG GCTCGACCCC
CCTGCCGCGG CCGCCTCGAC GGCTTCCTCG AAGGCCAAAA CTGAAGAGTG A
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| Protein sequence | MRRFALTALA VLLAGCTLGP DYRRPAVDVM PSYRFEERET RDTANTDWWK EFQDPVLDSL
IAEALANNRN VRIAAANIDQ AAGVLMQTRA PLFPQVSYSG SATRRRASER GSDVLSGFVS
NPRNSFELLA GANWEIDLWG RIRRLSEAAR ANLLASEEAR RGVVLSLVAS VAGTYIQLRG
LDDQLEISRR TLAVYGESLR LFELQFAHGQ VSQMTVEQAR SQYETAAATI PQIESQIAQT
ENGLSTLLGR NPGPVDRGKS IRELTPPAIP SGLPSQLLER RPDLAQAEQN LIAANAQIGA
AKALYFPAIS LTAALGTQSS ELSDLFKGPA RTWSYAGSFT GPIFTAGAIA GQVKQAEAMQ
KAALESYQNA ILNAFSDVES ALVARRKLSE QLEAQEALVR TLKEYDRLAW LQYNGGYTPY
LTVLTAETQL FPAELTTSEV RTALMAAYVN IYKVMGGGWV NRADALTREA PAAAPLGLDP
PAAAASTASS KAKTEE
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