| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1076 |
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| Symbol | |
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| ID | 4460841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1326832 |
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| End bp | 1330023 |
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| Gene Length | 3192 bp |
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| Protein Length | 1063 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639701841 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_845205 |
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| Protein GI | 116748518 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.421657 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.874852 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCTCCA AATTCTTCAT CGAACGGCCC ATTTTCGCCA CGGTCGTTTC GCTCATCATC
GTGATAGCAG GCCTGGTATC GATGAAGGCC CTGCCCGTTT CACAGTATCC CACCATCACG
CCGGTGCAGA TCCAGGTGAC GACCACTTAC CCCGGCGCGG ACTCGAAGAC GGTCGGGGAC
TCCGTGGCGG CTCCCATCGA GGAGCAGATC AACGGCGTCG ACAACATGCT CTACATGACC
TCGACCAGTT CCAACACCGG CCAGCTGACG ATCACCGTTT TCTTCAGCCT CGACACCGAC
CCGGATATCG CCCAGGTACA GGTCCAGAAC CGGGTGAACC TCGCCGCGCC GCAGCTGCCT
GCGGCAGTGG TGCAGTATGG GGTTTCGGTG CAGAAAAAGT CGTCGAGCAT GCTGATGATC
ATCGGAGTGA CCAACAAGGA CGGCCGTTTC AGCTCGGAAT ACGTCACCAA TTACGCCAAT
GTTTATGTGC TCGATGCGGT CAAACGGGTC AATGGAGCGG GCCAGGCGCA GATTTTCGGA
GTGCCCGACC AGGCGATGCG CATTTGGATG AACCCGGACC GGATGGCCTC CCTGGGGATA
ACGACAACGG ATATTCAAAA CGCGGTGACT CGTCAGAACG CCCTGTTCGG TGCCGGCCAG
ATCGGCCAGC AGCCCAATGC CGGCCACATT CAGCTCACGT TCCCGGTCGT GACCCAGCCT
CCCTTCGTCC AGCCGTCGCA GTATGAAGAC ATCATTCTGC GCGGCAGCCG GGACGGCAGT
GCCATTGTCC GACTCAAGGA CGTCGCCCGC GCCGAAGTCG GCAGAAAGGC CTACGTCGAC
GACAACAGGT TGAACGGCGC TCCCTCGGCT CTCATCGCCG TCTATCAGCA ACCGGGCGCA
AACGGCCTCG ATGTTTCCAA GGCCGTCCGC CAGACCCTGG AGAAGCTGAA ACGCACGATG
CCCGACGGCA TCGAATACCA AGTGGTTCTC GACACCACCG ATTTCGTGCG GCTCTCCATC
GAGGAGATCA TTCACACCCT GATTGAGGCC ATAATCCTCG TGGTGTTGGT CGTTTACCTC
TTTCTCCAGA GCTTTCGCGC CACCGTCATC TGTTCGGTCG CCATCTTCGT GGCGCTCATC
GGCACCTTCC CCGGCATGCT CGCTATGGGA TTCTCGATCA ACCTGCTGAC CCTGTTCGGC
CTCATCCTCG CCATCGGGAT GGTGGTCGAC GACGCCATCG TCGTGGTCGA AAACGTCGAA
CGCAACATGG TGAAGTATCA CCTCGCGCCC CGGGAAGCGA CGATCCGGGC GATGGAGCAG
ATCGGCACAT CCCTTATCGC CGTGGTGCTG GTGATGGCAT CGGTTTTCAT CCCGGCCGCA
TTCCTGCCCG GCACCACGGG GCAGCTTTAC AAGCAGTTCG CCATCACCAT CGTCATTTCG
GTGGCGCTCT CGGGGTTCGT GGCGCTCACC CTCACCCCGG CCATGTGCGG GATCCTGCTC
AAGCACAGGC CCCCTCCGCA ACGCGGCCCC TTTGCCTGGT TCAACCGGCA GTTCGACCGC
TTCACCGTTG CCTTCGGCAA TGCGGTGGTG TTCATGATCA GGCGGATGGG GGTGGCCTTC
GTGCTGCTCG CCGTATTGAT CGGCGGGCTC GCATACCTGT TCCGGACCAC CCCGACGAGT
TTCGTGCCCA ATGAAGATCA GGGCTATTTG ATGTCCATGA TCGTTATGCC CGATGCCGCC
AGCCTCAACC GCACCTCCCG CACCACGGAG GTGGTGGACG GCCTGTTCGC CGAAAATCCC
GCCGTGGCCG ACCGGGCGGT CGTGAACGGC TACAGCCTCA TCGACGGTCA GTACAAGACA
AACGTTGCGA CCATATTCGT GCCGCTCAAG GACTTCAAGG AACGCTACTC CTCCATCGAG
CGCGCCCGAA GGGAAAACGC CAAAGCGGTC CTTCTGCAGG CTTTGTCGGA TGCGCGCAGG
AAGATCAATA CGGGGGTGTT CATTCCCATC GCTCCGCCGG CGATCCCCGG CATCGGAACT
ACGGGAGGCT TCGAATTCTG GATACAGGAC AAGAAGGCCG GAGTTCCGGA GCGGCTCTAC
GACGTAACGC AGGAATTTCT CGCCAAAGCC CGCCGGCGGT CCGAGCTGAG CGGCCTGAAC
TCGACATTCC GGGCCGTCTC GCAGCAGCTC CACGCGGAAG TCGACCGGTC CAAATCCGTG
CTTCTCGGGG TTCCGGTTGC GGACGTCTAC AGCACTTTGC AGGCTCAGTT CGGTTCGATC
ACGGTAAGCC AGTTCAACCA GTTCAGCCGT GTGTGGAACG TGGTCCTCCA GTCCGACGCC
CCTTACCGAA AGGACCCGTC GGACATCACG CGTCTCTACA CGAGGTCCCG GGACAACCAG
ATGGTTCCCC TTTCGGCGGT GGTCGAGACC AGGTATGTCA CCGGCCCCGA TCTGGTGCCG
CATTTCAACG GCTTCCCCGC CGCGCAGGTC ACGGGTTCCG CCGCCGTGGG CTACAGCTCG
GGCGACGCCA TCAAGGTGAT GGAAGAGACG GCGCGCGAGG TGCTCCCCGA CGGCTATGAC
TTCGCCTGGT CGGGCATGGC CTTCGAGGAG AAGAAGGCGG GCGCGACCTC GATGGCCGCC
TTCGCCTTCG GCCTGATCAT CGTTTTTCTC GTGCTGGCCG CCCAGTTCGA GTCCTGGACG
CTTCCGGGAT CGGTCATGAC GGCGGTGCCC TTCGGGATCC TCGGCGCGCT CGCGTTCAAC
TGGCTGCGGG GCCTGGAAAA CGACGTCTAT TTCCAGATCG GTCTCCTGGT GCTCATCGGG
CTCGGGGCCA AAAACGCGGT CCTTCGCGTG ACCTTCGCCG TCGAGCTGCG TCAACAGGGA
TTGTCGATCA TGGACGCGAC CATCAAGGCG GGCGAGGAGC GGCTGCGACC GATCATCATG
ACTTCGCTCG CCTTCATCCT GGGGGTGCTT CCGCTGGCCA TCGCCACGGG AGCGGGCGCC
AACGCCCGCC ACTCCATCGG CACGGGCATC ATGGGCGGCA TGATCGGCGA AACCACTCTG
GCCATGCTTT ACGTGCCGCT CTTTTTCTAT ATCTTCGACC GGCTCGCCGA ACGCTCCTCG
GGGAAGAAGA AGACCTCACC CGGGGAGGGA TCGCCGCCGC CCACGCTCCA TGAGAGCCCG
GAGGTCAACT GA
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| Protein sequence | MFSKFFIERP IFATVVSLII VIAGLVSMKA LPVSQYPTIT PVQIQVTTTY PGADSKTVGD
SVAAPIEEQI NGVDNMLYMT STSSNTGQLT ITVFFSLDTD PDIAQVQVQN RVNLAAPQLP
AAVVQYGVSV QKKSSSMLMI IGVTNKDGRF SSEYVTNYAN VYVLDAVKRV NGAGQAQIFG
VPDQAMRIWM NPDRMASLGI TTTDIQNAVT RQNALFGAGQ IGQQPNAGHI QLTFPVVTQP
PFVQPSQYED IILRGSRDGS AIVRLKDVAR AEVGRKAYVD DNRLNGAPSA LIAVYQQPGA
NGLDVSKAVR QTLEKLKRTM PDGIEYQVVL DTTDFVRLSI EEIIHTLIEA IILVVLVVYL
FLQSFRATVI CSVAIFVALI GTFPGMLAMG FSINLLTLFG LILAIGMVVD DAIVVVENVE
RNMVKYHLAP REATIRAMEQ IGTSLIAVVL VMASVFIPAA FLPGTTGQLY KQFAITIVIS
VALSGFVALT LTPAMCGILL KHRPPPQRGP FAWFNRQFDR FTVAFGNAVV FMIRRMGVAF
VLLAVLIGGL AYLFRTTPTS FVPNEDQGYL MSMIVMPDAA SLNRTSRTTE VVDGLFAENP
AVADRAVVNG YSLIDGQYKT NVATIFVPLK DFKERYSSIE RARRENAKAV LLQALSDARR
KINTGVFIPI APPAIPGIGT TGGFEFWIQD KKAGVPERLY DVTQEFLAKA RRRSELSGLN
STFRAVSQQL HAEVDRSKSV LLGVPVADVY STLQAQFGSI TVSQFNQFSR VWNVVLQSDA
PYRKDPSDIT RLYTRSRDNQ MVPLSAVVET RYVTGPDLVP HFNGFPAAQV TGSAAVGYSS
GDAIKVMEET AREVLPDGYD FAWSGMAFEE KKAGATSMAA FAFGLIIVFL VLAAQFESWT
LPGSVMTAVP FGILGALAFN WLRGLENDVY FQIGLLVLIG LGAKNAVLRV TFAVELRQQG
LSIMDATIKA GEERLRPIIM TSLAFILGVL PLAIATGAGA NARHSIGTGI MGGMIGETTL
AMLYVPLFFY IFDRLAERSS GKKKTSPGEG SPPPTLHESP EVN
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