Gene Sfum_1064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1064 
Symbol 
ID4460672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1312218 
End bp1312778 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content65% 
IMG OID639701828 
ProductUracil phosphoribosyltransferase 
Protein accessionYP_845193 
Protein GI116748506 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2065] Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.77937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.545768 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGAGA ATGGGTCCCG TGTCGTCATG GAAGCCCGCG ATATCCGGAG CGCTCTGGAA 
AGACTCGCCC GGGAGATCGT CGAACAACCC GTGGACCCGA ACGGCCTGGC GCTGGTCGGC
ATCCACACGG GCGGCGTGTT CCTGGCCAAG CGGCTGGAAA CGCTCATCTC GAAGAAACTC
AAGCACTCCA TACCGGTGGG GACGCTCGAC ATCACGCTCT ACCGCGACGA TTGGACCCGC
CTTCACACCC AGCCCGTGGT TCGGGCGACG AATCTTCCCT TTCCCATGGA CGACCGGGAC
GTCGTGCTCG TCGACGACGT CCTGTACACG GGACGCACCA TTCGAGCCGC CCTCGACGCC
CTCATCGATT ACGGCCGCCC AAAGCGCGTG CAGGTCGCGG CGCTGGTGGA CCGCGGGCAC
CGGGAGCTGC CCATCTGCGG GCAATTCATC GGCATTGAGC TCAAGACCCG GTCGGACGAA
CAGGTCAACG TGCTCCTGAA GGAAAAGGAC GGCGTCGACC GCGTGGTGAT CGAGCAGGCG
GCGCAGGCCC GCAAAGCCTA A
 
Protein sequence
MVENGSRVVM EARDIRSALE RLAREIVEQP VDPNGLALVG IHTGGVFLAK RLETLISKKL 
KHSIPVGTLD ITLYRDDWTR LHTQPVVRAT NLPFPMDDRD VVLVDDVLYT GRTIRAALDA
LIDYGRPKRV QVAALVDRGH RELPICGQFI GIELKTRSDE QVNVLLKEKD GVDRVVIEQA
AQARKA