| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1059 |
|---|
| Symbol | |
|---|
| ID | 4460667 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 1307462 |
|---|
| End bp | 1308673 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639701823 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_845188 |
|---|
| Protein GI | 116748501 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1900] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.224866 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCGG TGCAGAAGAG CTACCAGGAG ATCAACGAGA AGATTCGCCA GGGAAAGGCC
GTCGTCGTTA CGGCCGAGGA AATGGTGGGC ATCGTCAGGA AAAAGGGCGC GGTTCGCGCG
GCCAGGCAGG TGGACGTCGT GACCACCGGG ACTTTCGCGC CCATGTGCTC CTCGGGGGCT
TTCATCAACT TCGGCCACAC GCAGCCTCCC ATCAAGGCGA GCAAGGTCTG GCTCAACGAC
GTGCCCGCTT ACGGGGGGCT CGCGGCCGTC GACGTCTATC TTGGCGCCAC GGAACCCACC
TTCGACGATC CCCTGAACAA GGTTCGCCCC GGGGCCTTCG AGTACGGGGG CGGCCATGTC
ATTCACGACC TGGTGGCCGG GAAGTCCGTC CGGCTCCGCG CCGAAGCCTA CGGAACGGAT
TGCTATCCCA ATCGCCAGGT GGATATGACG GTCACTCTTG CCGATCTCAA GTACGCCTTG
CTTTGCAATC CCCGCAACGC GTACCAGAAC TACAACTGCG CCGTGAACCT CTCGGAAAGG
ACCATATTCA CCTACATGGG AACCCTCAAA CCCCGGATGG GCAACGCGAA TTATTCCACA
TCCGGGCAAT TGAGCCCGCT TCTCAACGAC CCTTACTACA GGACTCTCGG GCTGGGCACC
CGCATCTTTC TCGGAGGCGC CCAGGGGTAC ATCGTGTGGC CCGGCTCCCA GCACAACCCG
GATGTACCGC GCGGCCCCAA CGGCGTCCCG CGCTCCCCGG CCGGAACCCT GATGGTCCTG
GGAGACCTCA AGCAAATGTT GCCGCGCTGG CTCCTGGGCG TCAGCCTCCA GGGGTACGGG
TGTTCGCTTT CCGTCGGGCT GGGCATACCA ATACCCATTC TCGACGAAGA AATGGCGTTC
TACGCCGGCG TGTCCGACGA TGACATCGTG ACGCAGGTGA AGGACTACAG CTTCACGCGT
TCGGACCCCC TCGGAGAGGT CAACTACGCT CAGCTCAAAA GCGGGACGAT CAGGATCGAA
GGCCACGACG TGCCGACGGT GCCGCTGTCG AGCTATGTCC GGGCCAAGGA GATCGCGACG
ATCCTCAAGG AATGGATCCG TGAGGGAAGC TTTCTTCTGG GAGAGCCGCA GCACTTTCTC
CCGACCGTGC CGCGACCCGG GAGCGTGATG CGGCCGGAGG AGGCGGGACG ACCGGCAGAC
TCGTCGGCGT GA
|
|---|
| Protein sequence | MASVQKSYQE INEKIRQGKA VVVTAEEMVG IVRKKGAVRA ARQVDVVTTG TFAPMCSSGA
FINFGHTQPP IKASKVWLND VPAYGGLAAV DVYLGATEPT FDDPLNKVRP GAFEYGGGHV
IHDLVAGKSV RLRAEAYGTD CYPNRQVDMT VTLADLKYAL LCNPRNAYQN YNCAVNLSER
TIFTYMGTLK PRMGNANYST SGQLSPLLND PYYRTLGLGT RIFLGGAQGY IVWPGSQHNP
DVPRGPNGVP RSPAGTLMVL GDLKQMLPRW LLGVSLQGYG CSLSVGLGIP IPILDEEMAF
YAGVSDDDIV TQVKDYSFTR SDPLGEVNYA QLKSGTIRIE GHDVPTVPLS SYVRAKEIAT
ILKEWIREGS FLLGEPQHFL PTVPRPGSVM RPEEAGRPAD SSA
|
|---|
| |