Gene Sfum_1058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1058 
Symbol 
ID4460666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1306495 
End bp1307277 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content62% 
IMG OID639701822 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_845187 
Protein GI116748500 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.207885 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGAAT TGGTGGCCGC GTGCCTTCAG CTCCGGGTCG TGCCGGGGAA TGTGGACGCC 
AACCTGGCCA ATGCCCGGGA GGGCATTGAA GAGCTCGCCT CGGGGGAATG CCGCCTGGTC
GTTTTGCCGG AGATGTGGGC ATGCGGGTTT CCCTACTCCA GGTTGCAGGA GGTCGCGTCG
AGAACCCCTG AAGTCGTTGA AGAAATGAGG GGGTGGGCGC GCCGCCATGG AATGGTGCTT
GTGGGGAGCC TCCCGGAAAG CGTCGACGGC AGGATCTACA ACACCAGTTA CGTCATCGAC
GCGAACGGAG AGATTGCCGG GAGTTACCGA AAAGTCCACC TCTTTTCCCT GCATCACGAA
GACCTCCACT TCGGCCGCGG CGAAACCTCT CTGGTGTGCT CGACCGAGGC GGGGGAACTG
GGCGTCATGA TCTGTTATGA CCTGCGATTC CCGGAACTGG GGCGAAAACT CGCGCTGGAC
GGCGCGCGGA TCATGTGCGT ATCGTCGCAC TGGCCCGACA TCAGAATCGA TCACTGGTCC
CTGCTGCTGC GAGCCAGGGC GGTGGAGAAT CAACTGTTCG TCATCGGCTG CAACGGCTGC
GGCACCGAGA AGAAAATGCG ATACGGCGGG GCCTCCGCCA TCATATCCCC CATGGGAAAG
GTGTTGATCG AAGCCGGCAC CGGCCCGGAA TCGATTGCCG CGGCATTGGA CATGGAGGAG
GTCGACAGGT TTCGAAAGCT CATCACCTGT TTCCCGGACC GTGTGCCGGC CGTGTACGAA
TAG
 
Protein sequence
MRELVAACLQ LRVVPGNVDA NLANAREGIE ELASGECRLV VLPEMWACGF PYSRLQEVAS 
RTPEVVEEMR GWARRHGMVL VGSLPESVDG RIYNTSYVID ANGEIAGSYR KVHLFSLHHE
DLHFGRGETS LVCSTEAGEL GVMICYDLRF PELGRKLALD GARIMCVSSH WPDIRIDHWS
LLLRARAVEN QLFVIGCNGC GTEKKMRYGG ASAIISPMGK VLIEAGTGPE SIAAALDMEE
VDRFRKLITC FPDRVPAVYE