| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1043 |
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| Symbol | |
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| ID | 4460651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 1287527 |
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| End bp | 1288372 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639701807 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_845172 |
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| Protein GI | 116748485 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0755702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000682757 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTCGCGT CGTTGCCCCC CACATCGAAT TTATTCAATT CTTCCCCTGC TGGACGATGG
AGTAGCAGAA TCCAGATACC CATCAATGAT CAACCCCTAA TCCAAAAATT TGTCCGTTTC
TATCAGGAGC AGGGTCGGAG AACGTTCAAG GAATCCCTGG AACGTTCACG ATTCTATGTT
CCCATCATGA CCGAAATTCT GGAGTGTCAT GGTGTTCCCC CTGAAATGAT TTCCGTCGTC
ATGGTGGAAA GCGCGTTTCA GAGGAATGCA TCACACAAGG GAGCGGGCGG TTATTGGCAA
CTGTTGGCAC CGACAGCCCG GGCAATGGGA TTGCGGGTGG ACGGCTGGGT CGACGAGAGA
CGAGACCCGA TCAAGTCCAC GAGGGCTGCT GCCAAGTACT TGCGCTCATT CTATGAGCAA
TTCGATTCTT GGACGTTGGC ACTGGCCGCC TATAATGCGG GCGGCGGTTC CGTCCAGAGC
GCGCTTAGGA GAAGCCGCGC AAACGATTTC TGGGAGCTTT CCAAACGCGG GAGATTGCCT
TCGCTCACAA GGCACTATGT CCCGAAGGTG TTGGCGGCGA TGCACATCAT GCAGAACCTG
GAAAAACACG GGTTCAAGAG CCCGGGTCAG TTTTCGAATT ACGACTATGA ATCCATATGG
GTGCAGGCAC CTCTCAAGCT CGAGCAGGTG GCCCAGTGGA TCGATGTTCC GATGACCCAA
CTTCAGGAGC TCAACCCTTC GCTGCGTTTG GATACGTTGC CTCCCGATTC CGGCTATGCC
CTGCGTTTGC CTTCCGGAGG CAGGGACAAG TTCGATATAG CCTTCGAAGA CCATTTCCGG
AAGTGA
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| Protein sequence | MLASLPPTSN LFNSSPAGRW SSRIQIPIND QPLIQKFVRF YQEQGRRTFK ESLERSRFYV
PIMTEILECH GVPPEMISVV MVESAFQRNA SHKGAGGYWQ LLAPTARAMG LRVDGWVDER
RDPIKSTRAA AKYLRSFYEQ FDSWTLALAA YNAGGGSVQS ALRRSRANDF WELSKRGRLP
SLTRHYVPKV LAAMHIMQNL EKHGFKSPGQ FSNYDYESIW VQAPLKLEQV AQWIDVPMTQ
LQELNPSLRL DTLPPDSGYA LRLPSGGRDK FDIAFEDHFR K
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