| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1037 |
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| Symbol | |
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| ID | 4460940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1281567 |
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| End bp | 1283498 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639701801 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_845166 |
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| Protein GI | 116748479 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000129321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000121148 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAAACGGA TTAGCAGATA CTCCCGGATT TTGCTGCTGG TGGTAACGGT TGCATTCCTT
GCCGGATGTC CCGGTTCCCA GCAACCTGCC GAACAGGCTC CGAGTCGCCC GTCTCTCACC
GGGACGACGC CTCCGGACGC CGAAAAGATG GTCCAGCAGG CCGAGCAGGC GCGCAAAAGC
GGAAATATTC CCAAAGCCAT ATCCCTCTGG GAAAAGGTCA TCCAGAAATA TCCCGGCCAT
GCCGTCGCGG CACGGGGATT TTCCGTGGTC GGCAACCTTT ACCTGGCCCA GGGACAACCG
GATCGCGCCC TGCAGTATTT CGACTACCTG CTTTACACCT ATCCCAACTG GGACGGAATC
GGCCAGGCAC GGCTGGATCG ACTCCGCGCG CTTGCCGCCG CCGGCAAGAA GAAACAGGCC
ATGAAGGAAG CGGTGCCGCT GTGGGAGACT TCGACGTCCC AACCTGATTT GCAGGTGGGC
CTTGCGTCCT TCATGGCCGG GCTCTACGGC GCCGAAGGGG ATATCGAGAC GGGCTGGGAC
TGGGCCGGTT CGGGCTTCCC GGCGGCCTCA ACCCCGGAGC AGAAGAAAAC GCTCACCCGG
GCCACCGTCG ATTTGCTGAA AAATGCGGAC GAGGGGCAGG TGAAGAGGCT GTATAAAAAG
ACTCCTTCGG ATTTCATGAA GGTCTTTCTG GATTTTCGGA TGGCCCAGCT GGAAATGCAG
AAAGGGCGCC AGGACCCGGC GCGAGCCCGC CTTAAGGAGC TTCTCGCCCG GAACGGGACT
CACCCGCTGG TCCCGGAGAT ACAGGCGGCC ATCCGCGGCA CCCGCCCGGA AGGGGCTGAA
TATGCCGTCA ATGCCGATCG CATCGGAGTG CTCATTCCAC TCAACGGTTC ATTTGCCAGG
TACGGCGACA TGGTGCTCAA AGGCCTGACG CTCGCGAATT CGGACTGGAG CGAGCGATAC
CCGGGCCAGC AGGTGTCGCT CGTGGTCAAG GACGCCCAGG CCGATGCAGC CGTCACCACC
CGGTCTTTCG AGGAAATGGT GAAAAAGGAC GGCGTCCTTG CCGTGATCGG TCCCCTTGGG
GCGCAGGCGG CCAAAGAGGT GGCGCCGCTC GCGGACCGCT ACGGGGTGCC CGTCCTGACC
ATGACGCAAA AGGATGACGA GGGCGCGGCG AGTTCCTTCG TCATTCACAT CTTCCTGGAC
AGTCGCGAGA TCGTGCGATC CGTCGTAAAG CACTGCCGCG ACAAACTCGG TCACACCCGT
TTCGCGGCGC TCTATCCGGA CGACCGCTAC GGGCAGAAGC TGGCGAAGAT TTTCTCCGAA
GTCGTTCCGG AACTGGGCGG CCAGGTTATG GCCAGTGTTT CCTACAAGGA AAAAACGACG
GATTTCAAGG AGTCGCTGCA AAAGCTCATC ACCATCGCCA AGAAGAACCA GCCCCCGACC
GGCGTCGAAA CCACGCCGTT CGATGCGCTG TTCATTCCCG ACCAGGTGCA GTCGGTATCG
CTCATCGCCC CCCAACTCCC ATACAACAAC GTGGTGGGCG CCACTCTGCT CGGGACCAAC
CTGTGGAGCG AAGCACCGCT CGTGCAGGCC GGCGGGGTCT ACATCGAGCA TGCGCTGTTC
GCCACGGCCT ACTACCCCGA AAACCCGAGC TCCCGGGCGA AGGACTTCCG CGAGCGATTT
CAGGAGAAAT TCGGGGCGCC GCCATCCTAC CTGGAAGCCC AGGCCTACGA CGCGCTCATG
CTGGTGCTGC AGGCCCGCAG CGCTTTGCGA TCGACCGGGA TCGACCGCGC ATCCCTCCTG
CAGACCATCA TGACGGCAAA GGGCTTCGAG GGGATCGCGG GGAAGTACTC CTTCTCCCCG
ATGGGAGGCT TGCAGCGGAA CTATTTGCTC CTCCAGGTGC AGGACGGAAA GCTTGTGCAG
ATTGCTCCAT GA
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| Protein sequence | MKRISRYSRI LLLVVTVAFL AGCPGSQQPA EQAPSRPSLT GTTPPDAEKM VQQAEQARKS
GNIPKAISLW EKVIQKYPGH AVAARGFSVV GNLYLAQGQP DRALQYFDYL LYTYPNWDGI
GQARLDRLRA LAAAGKKKQA MKEAVPLWET STSQPDLQVG LASFMAGLYG AEGDIETGWD
WAGSGFPAAS TPEQKKTLTR ATVDLLKNAD EGQVKRLYKK TPSDFMKVFL DFRMAQLEMQ
KGRQDPARAR LKELLARNGT HPLVPEIQAA IRGTRPEGAE YAVNADRIGV LIPLNGSFAR
YGDMVLKGLT LANSDWSERY PGQQVSLVVK DAQADAAVTT RSFEEMVKKD GVLAVIGPLG
AQAAKEVAPL ADRYGVPVLT MTQKDDEGAA SSFVIHIFLD SREIVRSVVK HCRDKLGHTR
FAALYPDDRY GQKLAKIFSE VVPELGGQVM ASVSYKEKTT DFKESLQKLI TIAKKNQPPT
GVETTPFDAL FIPDQVQSVS LIAPQLPYNN VVGATLLGTN LWSEAPLVQA GGVYIEHALF
ATAYYPENPS SRAKDFRERF QEKFGAPPSY LEAQAYDALM LVLQARSALR STGIDRASLL
QTIMTAKGFE GIAGKYSFSP MGGLQRNYLL LQVQDGKLVQ IAP
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