Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1035 |
Symbol | |
ID | 4460938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 1278461 |
End bp | 1279030 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639701799 |
Product | GrpE protein |
Protein accession | YP_845164 |
Protein GI | 116748477 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00038029 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000654048 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCAAAA AACATATGAA GGGAAACGGC GGTGAGGTTC CCGAGAACTC GGAGATGAGC GGGAGCGAGG AACTGGTCGC CGTTGAGCCC GGGGAACCCG ACTACAGGGA GTTGCTGGCG CGCAAAGAGG AAGAGCTCAA GCAGTCCCAG GACCGCCTGT TGCGCATGGC GGCGGAATTG GACAACACCA GGAAACGGCT CGAACGGGAG AAATCCGAAG GGATCGCCTA CGCCAACGAA GGCCTCATGA AGGACCTGCT TCCCGTGCTC GACAACCTCG AGCGCGCCCT GGAGCACAGC GAGAACGAGG CGGACTGCGG GAGCCTGGTG GAGGGAGTGC GCATGACGTT GAAGGGCTTT CTGGACAGCC TGGCCCGGTT CGGATGCACG CCGTTCGAGT CGGTGGGCAA CGCTTTCGAT CCCAACTTCC ATGAAGCCGT GATGCAGGAG GAAGTCGCCG ACTATCCCGA ACGCACGGTG ATACGGGAAT TCCAGAAAGG TTACACGCTC AAGGAACGGC TGCTGCGTCC CGCCATGGTG GTGGTGTCGA AAGCCGCCGG TGACACGTAG
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Protein sequence | MSKKHMKGNG GEVPENSEMS GSEELVAVEP GEPDYRELLA RKEEELKQSQ DRLLRMAAEL DNTRKRLERE KSEGIAYANE GLMKDLLPVL DNLERALEHS ENEADCGSLV EGVRMTLKGF LDSLARFGCT PFESVGNAFD PNFHEAVMQE EVADYPERTV IREFQKGYTL KERLLRPAMV VVSKAAGDT
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