Gene Sfum_1035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1035 
Symbol 
ID4460938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1278461 
End bp1279030 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content61% 
IMG OID639701799 
ProductGrpE protein 
Protein accessionYP_845164 
Protein GI116748477 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00038029 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000654048 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCAAAA AACATATGAA GGGAAACGGC GGTGAGGTTC CCGAGAACTC GGAGATGAGC 
GGGAGCGAGG AACTGGTCGC CGTTGAGCCC GGGGAACCCG ACTACAGGGA GTTGCTGGCG
CGCAAAGAGG AAGAGCTCAA GCAGTCCCAG GACCGCCTGT TGCGCATGGC GGCGGAATTG
GACAACACCA GGAAACGGCT CGAACGGGAG AAATCCGAAG GGATCGCCTA CGCCAACGAA
GGCCTCATGA AGGACCTGCT TCCCGTGCTC GACAACCTCG AGCGCGCCCT GGAGCACAGC
GAGAACGAGG CGGACTGCGG GAGCCTGGTG GAGGGAGTGC GCATGACGTT GAAGGGCTTT
CTGGACAGCC TGGCCCGGTT CGGATGCACG CCGTTCGAGT CGGTGGGCAA CGCTTTCGAT
CCCAACTTCC ATGAAGCCGT GATGCAGGAG GAAGTCGCCG ACTATCCCGA ACGCACGGTG
ATACGGGAAT TCCAGAAAGG TTACACGCTC AAGGAACGGC TGCTGCGTCC CGCCATGGTG
GTGGTGTCGA AAGCCGCCGG TGACACGTAG
 
Protein sequence
MSKKHMKGNG GEVPENSEMS GSEELVAVEP GEPDYRELLA RKEEELKQSQ DRLLRMAAEL 
DNTRKRLERE KSEGIAYANE GLMKDLLPVL DNLERALEHS ENEADCGSLV EGVRMTLKGF
LDSLARFGCT PFESVGNAFD PNFHEAVMQE EVADYPERTV IREFQKGYTL KERLLRPAMV
VVSKAAGDT