Gene Sfum_1019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1019 
SymbolnifH 
ID4460955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1254398 
End bp1255222 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content59% 
IMG OID639701782 
Productnitrogenase reductase 
Protein accessionYP_845148 
Protein GI116748461 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1348] Nitrogenase subunit NifH (ATPase) 
TIGRFAM ID[TIGR01287] nitrogenase iron protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.855562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.490785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAAA TTGCAATTTA CGGCAAGGGG GGCATCGGAA AGTCGACGAC GACTCAGAAC 
ACCGTGGCGG GTCTGGCGGA GATGGGACGG AAGGTCATGG TCGTGGGCTG CGATCCCAAA
GCGGATTCAA CAAGGTTGCT GCTCGGGGGG CTGTCTCAGA AGACAGTCCT CGACACTTTG
AGGACCGAAG GCGAGGACGT GGAGTTGGAC GACATCCGCA AGGTGGGGTT CAGCAAATCC
ATCTGCGTGG AATCGGGAGG GCCGGAACCG GGCGTGGGCT GCGCCGGACG TGGGATCATC
ACTTCGATCA ACCTGCTCGA ACAGCTCGGG GCCTACGCCT CGACCCAGGC CCTCGACTAC
GTGTTTTACG ATGTTCTGGG CGACGTGGTG TGCGGCGGTT TCGCAATGCC CATTCGGGAA
GGCAAGGCCC GCGAGATCTA CATCGTGGTC TCGGGCGAGA TGATGGCCAT GTACGCGGCG
AACAACATCT GCAAAGGCAT CGTCAAGTTT GCCGAGGCGG GGGGCGTGAG GTTGGGCGGG
CTGATCTGCA ACAGCAGGAA GGTGGACAAT GAGAAGGAGA TGATCGAAGC CTTCGCCAGA
CAGTTGGGGA CGCAGATGAT CCATTTCGTG CCGAGGGATA ACATGGTCCA GAGGGCCGAG
ATCAATCGCA AGACGGTGAT CGAGTTCGAT CCCGCCCATT CGCAGGCGGA TGAGTATCGG
AGCCTGGCCC GTAAGATTGA GGACAACGAC ATGCACGTCA TCCCGAAACC CATGCACACG
GATCATCTTG AGAAGTTGCT CATTGAACAC GGGCTGGCGG CCTGA
 
Protein sequence
MRKIAIYGKG GIGKSTTTQN TVAGLAEMGR KVMVVGCDPK ADSTRLLLGG LSQKTVLDTL 
RTEGEDVELD DIRKVGFSKS ICVESGGPEP GVGCAGRGII TSINLLEQLG AYASTQALDY
VFYDVLGDVV CGGFAMPIRE GKAREIYIVV SGEMMAMYAA NNICKGIVKF AEAGGVRLGG
LICNSRKVDN EKEMIEAFAR QLGTQMIHFV PRDNMVQRAE INRKTVIEFD PAHSQADEYR
SLARKIEDND MHVIPKPMHT DHLEKLLIEH GLAA