| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1004 |
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| Symbol | |
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| ID | 4460923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1232520 |
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| End bp | 1233224 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639701767 |
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| Product | ABC transporter related |
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| Protein accession | YP_845133 |
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| Protein GI | 116748446 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.664588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAGAAA AGGCCGAACG CCCGGATATC TTCGCCGAAG GGCTCACGCG TATCTACCGT
CTCGGAATGG GCGAGGTGAT CGGAATTCGC GGCATCGATC TCGAAATCCC GAAGGGTGAA
CTGGTTGTGC TCAAGGGCGA CAGCGGCTCA GGCAAGAGCA CCCTGCTCGC CTTGCTTGCG
GGCCTGGACC AGCCCACCGG AGGCCGCCTG TCCGTTGCGG GCCACGATCT GAGCTCGGCC
TCCCAGGCGC AGCTCACGGC ATTCCGCAGG CAAGTCGTCG GCATGGTCTT CCAGTCCTTC
AACCTTCTCC CCACGCTCAC CGTCATCGAG AACGTCTGTC TCCCGGCCTT GTTGGCCGGC
AAACCCCACG CCCGCACGCG TTCCGAAGCC GAAGAGCTGC TGAGCTGGCT GGGAATGGCA
TCGCGGCATG CGCACCGTCC CTCACAACTG TCGGGCGGGG AGATGCAAAG AACGGCCATC
GCTCGAGCGC TGATCAACAG TCCCGAGATC ATCCTCGCGG ACGAGCCGAC GGGAAACCTG
GACAGCAACA ACGGCGAAAT CGTCATGCAA CTGCTGGCCG AGCTCAATCG CCGTTTTCGC
CGCACCGTTA TCGTGGCGAC CCACAGCACG CTCGCCGACC CTTTTGCCAC TGTCTTACTG
CGGCTCAAAG ACGGCGCCGT CACCGAGACG TCATGGATCA AGTAG
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| Protein sequence | MKEKAERPDI FAEGLTRIYR LGMGEVIGIR GIDLEIPKGE LVVLKGDSGS GKSTLLALLA
GLDQPTGGRL SVAGHDLSSA SQAQLTAFRR QVVGMVFQSF NLLPTLTVIE NVCLPALLAG
KPHARTRSEA EELLSWLGMA SRHAHRPSQL SGGEMQRTAI ARALINSPEI ILADEPTGNL
DSNNGEIVMQ LLAELNRRFR RTVIVATHST LADPFATVLL RLKDGAVTET SWIK
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