Gene Sfum_1003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1003 
Symbol 
ID4460922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1230366 
End bp1232468 
Gene Length2103 bp 
Protein Length700 aa 
Translation table11 
GC content62% 
IMG OID639701766 
Productmolybdopterin oxidoreductase 
Protein accessionYP_845132 
Protein GI116748445 
COG category[C] Energy production and conversion 
COG ID[COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAA AGTGGATCAA GACCCATTGT GCCCGATTCG ACCACGGAGG CTGCGGCCTC 
GAGGTGCTGG TCAAAGACGG AAAGCTCGTG AAAATCAGGG CCGACAAGAC CGATGCCTAC
AGCGAGGGGT ACTGTTGCCC GAAAGGCCTT GCGGGAATCG ACCGCGCCTG CCATCCCGCA
CGCCTCAGGC AGCCCCTGCT GCGCCGTGGC CCCAGGGGCG AGGGCGAGTG GGAAGCCATC
CCGTGGGAGC GGGCACTGGA CATTCTCGTT TCCGAATTCC GGAGCGCCAT GGCCGGCGGC
GGGCCCGAGT CGGTTGCCTT TTGTCAGGGG GCGCCGCGCG GGCTCGAGTT TTTCATCCTG
TTGCGACTCG CCAACCTGTT GAATTGTCCC AATGTGGGTG CCGCTCAACA CGTGTGTCAC
ATGCCGCGCG AACAGATGGC GGCGGTGACC TGCGGGTTTT TCCCCGTTCC GGATTACGAC
AGCCCCACAC GCTGTGTCCT TTTGTGGGGC AGCGATCCGC AACGAACCAA CGAGGAGGGG
ATCCTCGGCG TCCGTTTTCA GAAGGCGCTC AAGCAGGGGG CGGGACTCAT CGTCGTGGAT
CCGCTCAAGA GCGGGCCTGC CCGGACGGCC GACTTGTGGT TGCAGATCCG CCCGGGGACC
GACGACTTGC TCGCCGTGGG TCTTCTTCAC GTCATCATCG AGGAGGGCCT CTTCGACCGG
CCTTTCGTGG AGCGATGGAC GACGGGTTTC GCGGAATTGA GAGCCGCGGT GCGGCCCTTC
GATCCGGCGA CGGTTTCGCT CGGCACGGGC ATTCCGGCGG AACGGATCAC CTCCGCGGCC
CGGCTCTATG CGAAATCGCG TCCGGCCATG ATCCACTGGG GAAATGCCGT CGAGCATTCC
GCGAACACCT CCCAGACCTG CCGGAGCCTC GTGCTCCTGA TGGCCCTGAC CGGCAATCTC
GAGGCGCCGG GAGGGAATGT GAAAGCCGAA GCCCCCAACG TCATGCGTCC TGCCGAGCTG
ATCTGCCTGA AGCAGTTTCC GGGAAGGATC GATAAGCTTC CGAACCGCAC TTGGGGCCTG
ATTCCGAGAC TTCTGACCGT CCCCAACTGG ATCCTGTTCC ACAGCATCCT CGATGCGTCA
CCCTATGCCG TGCAATGCCT TTACGTGCAG GCGACCAACC CGCTCATTTC CTGTTCGGAG
GCCGACAAGG TTCTCCAGGC ACTCCTGAAG CTCGATTTTC TGGCCGTGGC GGACATTTTC
ATGACGCCGA CGGCGGCATT CGCTGACCTG GTCCTGCCGG CCGCAACTCA CCTCGAGTAC
AACGACATCG GCCACTACGG CCTCCCGCAC GGCCTTGTCT TCGCCCGTCC CAAGGCGGTC
GACCCGCCGG GTGATGCCTG GCCGGACATC AGGATCCTGA ATGAATGGGG AAAGCGCATG
GGGTTCGGCT CGCGATTCTG GGACACGGAG GACCGGATCC TGGAGGCTGT GCTTGAGCCT
TCCGGGTTGA CCTATGGGGC TTTCGCCGCA AAGGGATTGT TGAGCGGCCC TCGAACCCAC
TATTCATACC GGGAAAAGGG GTTTGCGACA CCATCCGGAA AAGTCGAGCT GCATTCCAGC
CTGCTCGAAC AGTGGGGGTA TTCTCCGGTG CCCACCGTTG GGGTACATGC AGGAACGGAC
GAGCGGTTTC CATTTCTGCT CACCAGCCGG AAACCAAGGT TTTTCTTTCA TTCCGCGTAC
AGGCAGATCG AGAGCTTGAG GGAGAGAACG CCCCGCCCCA CGGTCATGAT CCATCCCGAC
ACCGCGTCCC GCCTGGGAAT TGCCGCGGGG ACGCCGGTCA GGATATCCAC GGTGTCGGGA
TCGGTGACGC AATTTGCGGA GCTCACTCGG GACATCGACC CGGAGGTGAT CTTCGCGGAC
TTCGGCTGGT GGTTTCCGGA AAGAGCGGAT GAAATGTTTG CGTGGAAGGA ATCGAACCTC
AACCAACTGA CCGGTGCGGG AGGTCCGACC GACCCCATAA TGGGCACGGT ACAGCTGCGC
GCGATCCCGT GCAGCATCGA AAAAGCGGAA TCCGTGCCCG CCATGAAATC ACGAACCCCT
TGA
 
Protein sequence
MSEKWIKTHC ARFDHGGCGL EVLVKDGKLV KIRADKTDAY SEGYCCPKGL AGIDRACHPA 
RLRQPLLRRG PRGEGEWEAI PWERALDILV SEFRSAMAGG GPESVAFCQG APRGLEFFIL
LRLANLLNCP NVGAAQHVCH MPREQMAAVT CGFFPVPDYD SPTRCVLLWG SDPQRTNEEG
ILGVRFQKAL KQGAGLIVVD PLKSGPARTA DLWLQIRPGT DDLLAVGLLH VIIEEGLFDR
PFVERWTTGF AELRAAVRPF DPATVSLGTG IPAERITSAA RLYAKSRPAM IHWGNAVEHS
ANTSQTCRSL VLLMALTGNL EAPGGNVKAE APNVMRPAEL ICLKQFPGRI DKLPNRTWGL
IPRLLTVPNW ILFHSILDAS PYAVQCLYVQ ATNPLISCSE ADKVLQALLK LDFLAVADIF
MTPTAAFADL VLPAATHLEY NDIGHYGLPH GLVFARPKAV DPPGDAWPDI RILNEWGKRM
GFGSRFWDTE DRILEAVLEP SGLTYGAFAA KGLLSGPRTH YSYREKGFAT PSGKVELHSS
LLEQWGYSPV PTVGVHAGTD ERFPFLLTSR KPRFFFHSAY RQIESLRERT PRPTVMIHPD
TASRLGIAAG TPVRISTVSG SVTQFAELTR DIDPEVIFAD FGWWFPERAD EMFAWKESNL
NQLTGAGGPT DPIMGTVQLR AIPCSIEKAE SVPAMKSRTP