| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0984 |
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| Symbol | |
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| ID | 4460027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1209391 |
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| End bp | 1210848 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639701748 |
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| Product | protease Do |
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| Protein accession | YP_845114 |
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| Protein GI | 116748427 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGTTT TCCGGACAGG TAAGGCTGGG ATTGTTTTTC GATGGATTCG GTTGTTTACG
TTCGTTGTCG CTCTGCCCTG TTTCCTGCTG TTGTCGCAAA GCATCCCCTC CGCGCACGGA
GCCGCATGGC AGCAGGGCCC TCCTTCGTTT GCCGATCTTG CCGAACAAGT CAAGCATGCG
GTTGTCAATA TTTCCACCAC GCAGGTCTTG AAGGAAAGCC CGATGCAACA GTTCATGGGA
CCGAACTCTC CCTTCCGCGA TTTTTTCGAT GACGATTTCA TGAAGCGATT CTTCGGTGAA
CAACCTCAAG GACAAAGAAA GGGGCATGCT TTGGGTTCCG GATTCATTAT CGACCAGTCC
GGTTTGATTC TCACGAACAA TCACGTCGTG GAGAAAGCTG ACGAAATCAA GATCAAAACG
CTCAGCGGAA AGGAATACGA CGCGAAAGTG GTCGGACGCG ACTCCAAGAC CGATATCGCC
CTGATCAAGG TCACGCCCGA CACGGATTTC CCGAAGCCCG CGCAGCTTGG CAATTCGGAC
GCCATCCGAG TGGGCGACTG GGTGATGGCG GTGGGAAATC CTTTCGCTCT GGGCCACACC
GTGACCGCGG GCATCATCAG CGCCAAGGGC AGGGTCATCG GGGCGGGCCC CTACGACGAT
TTCCTTCAGA CCGATGCGGC GATCAACCCC GGGAACAGCG GCGGCCCCCT CTTCAACATG
AACGCTGAAG TGGTCGGCCT CAATACGGCC ATTGTAGCCC ACGGGCAGGG CATCGGGTTT
GCCACCCCCA TCAACGTGGC CAAAGACATT CTGGAGCAGC TAAAATCCGG CAAGGTGGTT
CGAGGCTGGC TCGGGGTCAT GATCCAGGAC ATCACGCCCG AACTGGCCGA GTCGTTCGGT
ATCAAGGAGA CCAAGGGAGT CATCGTCGCC GACGTGGTGC CGGACGCTCC GGCTGAAGCC
GCGGGCATCA AGCGCGGGGA CGTCATCACT TCGGTCAATG GGAAAGAAAT CGACAATGCC
CCCGCACTCT CCAGGTACAT CGGTTTCAGC GCTCCCGGAA CCCCGCTTTC GCTGCAGATC
ATCCGGGACG GCAAACCCAT GTCGATCAAG GTGTCCAGCG GAACCATGCC CGACGAAGGC
AAGGAAGCCA AAGTCGAAAA AAAGGAAAGC CTCTGGGGCA TGGTCGTTCA GAATATCACA
CCGGAAATCG CTCAGCGCTT CGGATGGGAT GAAAACGAAC GCGGCGTCGT CATCACCGAA
GTAAAGCCGG GAAGCCCCGC CGGCGAAGCC CGGTTGCGCC CGGGAGATCT GATCAAGGAA
GTCAACCGGC AGAAGATTCA GAACATCAGG GATTACAACC AGGCCGTTCA GAAGCCTCAG
CGGGGCCAGA CCATGCTGCT GCTCGTGAAG AGGGGCAAGA ATACGTTTTT TGTCTCGCTG
AAGTCGACTC AGGAGTAG
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| Protein sequence | MEVFRTGKAG IVFRWIRLFT FVVALPCFLL LSQSIPSAHG AAWQQGPPSF ADLAEQVKHA
VVNISTTQVL KESPMQQFMG PNSPFRDFFD DDFMKRFFGE QPQGQRKGHA LGSGFIIDQS
GLILTNNHVV EKADEIKIKT LSGKEYDAKV VGRDSKTDIA LIKVTPDTDF PKPAQLGNSD
AIRVGDWVMA VGNPFALGHT VTAGIISAKG RVIGAGPYDD FLQTDAAINP GNSGGPLFNM
NAEVVGLNTA IVAHGQGIGF ATPINVAKDI LEQLKSGKVV RGWLGVMIQD ITPELAESFG
IKETKGVIVA DVVPDAPAEA AGIKRGDVIT SVNGKEIDNA PALSRYIGFS APGTPLSLQI
IRDGKPMSIK VSSGTMPDEG KEAKVEKKES LWGMVVQNIT PEIAQRFGWD ENERGVVITE
VKPGSPAGEA RLRPGDLIKE VNRQKIQNIR DYNQAVQKPQ RGQTMLLLVK RGKNTFFVSL
KSTQE
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