| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0983 |
|---|
| Symbol | |
|---|
| ID | 4460026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 1206759 |
|---|
| End bp | 1209005 |
|---|
| Gene Length | 2247 bp |
|---|
| Protein Length | 748 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639701747 |
|---|
| Product | metal dependent phosphohydrolase |
|---|
| Protein accession | YP_845113 |
|---|
| Protein GI | 116748426 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
|---|
| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.471679 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAAGCTC CGAAATCGGC GAACGCCTCC AGAATCCGCA TGATGTTGCC CTCTACAACC
GATGTCCACG GTTTCGACCT CGAACACTAT CGTGCACGCA TGTCCAAGTT CCTTGACCCG
GCAGAAAGCG ACAACCGCGT ATTTTATGAC GCTCTGCAGT ATTCATACGA CCTTCACAAG
GGCCAGACGC GTAAATCCGG CGCCCCTTAC ATCAGTCACC CCTGTTCGGT AGCCGAAATC
CTGGCGCGCG AACTGCATTT CCGGGACCCC CATCTGCTCG CCGCCGCCTT GCTTCACGAT
GTCGTGGAAG ATATCCCGGG AATCACCCTC GAAGATATTC TGCGCCGTTT CGGAAGCCGC
ATCGCGGAAC TGGTGGACGG ATGCACCAAG TTGACCCGCC ATCAACTGGA CCGAGCCGCC
CTGAAGGATC TTACGCACAG CAAGATTTTT CTCAGCGCCA GCCGCCGCCT CGGTGTCCTC
ATCATCAAGC TCGTGGATCG CCTCCACAAT CTGAGAACGC TTCATTACCT TCCCCAGGCC
AAGCGCCAGC GAATCGCGCA GGAAACGGTC GAGGTCTATG CCCCCATTGC CGCCCGGTTC
AATATCTACC CGCTCAAGCG CGAGCTCTAC CACCTTGCGC TATCCTACCT TTATCCGCGC
AAGAGTAAGA AGATCCTCCA GCACGTGCGG GAGCTTCGAA ATTCCGCGGA GGTTGTCGAC
ATAGAAAACC GGCTCCGCGA GATCCTCCTG CAAGCCGGGG TCGCCGCAGA CATTCGCCCT
CGTCCCAAGG GGCTCGGCAG CTACTACAAC GCACTGAAAC GCACGCTCGA CATCGGCAAC
CCCGAGAACT ACTTCGATTT CGCCGTCGTT CTGGCCACCG GCGAAGATTT GAAATGCTAC
CTGGTCCTGG GAATCATCTG CAAGGACTTC GTGTCCATTC CCCGCAGCTT GAGGGACTTC
ATCGCCAATC CCAAGATCAA CGGCTACCGG AGCCTGCACG TTCGGGTTCA TGTGGGAGGA
CAGAACTACC TGATCAAGAT CCGGACTGAA GAGATGGACC TCCAGGCTTC CTACGGCGTG
CTCCAGGACT GGACCGCCCA GACTCCGATG AGCGATGACC ACTGGGCGGA AATCAGCGAC
CTGCTGCGCA CCATCGGCGA GTACGGCGGG GCGGGACCGC AGCGAAAAGA GTTGATTCGG
CTCTCGGAAG CCGAAGAGAT TTTCGTGTAC AGTCCCCAGG GCGATATTTA CTACTTGCCC
AAGGGCAGCG TGGTGCTCGA TTTTGCCTAC AAAATCCACT CCGAACTGGG GGACCACTGC
CAGGGAGCCC TCGTCAACGG CTTGTGGGAA CCCCCGACCC GAGTCCTCAA GGATGCCGAA
ACCGTCGAAA TCGTCACCTC ACCCGACCTG CTCGATGTGG ACCCCGACCT CGAACAGCTT
TGCAAAACCC CCAGGGCGCG ATCCTTTCTG AACCGCCACC TCCAGCACAG AAGGCAGCAC
TTCGCCCGGG AGATCGGCCG CCAGGTCCTG AGCCAGGAGC TTCGGCGTCA CGGGTTCGGA
CCTGACGCAC TCGACGACGA GACGGTAGCG CTTCTGCTCG AAGTCATCAA TCTCAAGGAT
ATTTCGGAGC TTTACACACG ACTCGGCCAG GATCTCCTGT CCCCCGAGCT CGTTCTTTAC
TACCTGGAGG CGCCGCTGCA CGCCAAGGAC CGGCACCCCC ATCACAGCCC TCATCCTCCG
GACGAACGCA ACGCCATCCT GGTCTCGGAG CTGGACAAGG CTTTTCACAA ATTCGCTCGA
TGCTGCAACC CCTACCCCGG TCAGGAGAAT GTGCTGGCCA CGATCAGTGA GCGTGGAACG
ACCTTCCACG ATCCGCGATG CGAAGACCTG AAGAGCCGTC ACGGCCTTCA GCCTCAGCAT
CTGCTCGATG TCTGCTGGGA CTTCGACGGC ACCTGGCGTC ACGTTCTCGT CTTTCAACTG
CACATCCAGC AGCAGAGCAT CTCGGACCTG CTGCCCCTCC TGGCCCGCAT GCCTTCCACG
GTCCGGATCC GGTATATCGA ATCCGCCATC GGCAAACACA ACGAGCCCAC GGTCCGGCTG
AGCGTGGCGC TCCACAGCTT CGCCGAAGCC CGGGAGCTGT TTCGGATTCT GCCCGAAGAC
CGTGTCTGCA TCGATGAATA CGGCCGCCAG GGAGCGTCCG CCAGAGTCCA CACCGAGTGC
CCCTACGTTC CGGATCGGGC GCGCTGA
|
|---|
| Protein sequence | MQAPKSANAS RIRMMLPSTT DVHGFDLEHY RARMSKFLDP AESDNRVFYD ALQYSYDLHK
GQTRKSGAPY ISHPCSVAEI LARELHFRDP HLLAAALLHD VVEDIPGITL EDILRRFGSR
IAELVDGCTK LTRHQLDRAA LKDLTHSKIF LSASRRLGVL IIKLVDRLHN LRTLHYLPQA
KRQRIAQETV EVYAPIAARF NIYPLKRELY HLALSYLYPR KSKKILQHVR ELRNSAEVVD
IENRLREILL QAGVAADIRP RPKGLGSYYN ALKRTLDIGN PENYFDFAVV LATGEDLKCY
LVLGIICKDF VSIPRSLRDF IANPKINGYR SLHVRVHVGG QNYLIKIRTE EMDLQASYGV
LQDWTAQTPM SDDHWAEISD LLRTIGEYGG AGPQRKELIR LSEAEEIFVY SPQGDIYYLP
KGSVVLDFAY KIHSELGDHC QGALVNGLWE PPTRVLKDAE TVEIVTSPDL LDVDPDLEQL
CKTPRARSFL NRHLQHRRQH FAREIGRQVL SQELRRHGFG PDALDDETVA LLLEVINLKD
ISELYTRLGQ DLLSPELVLY YLEAPLHAKD RHPHHSPHPP DERNAILVSE LDKAFHKFAR
CCNPYPGQEN VLATISERGT TFHDPRCEDL KSRHGLQPQH LLDVCWDFDG TWRHVLVFQL
HIQQQSISDL LPLLARMPST VRIRYIESAI GKHNEPTVRL SVALHSFAEA RELFRILPED
RVCIDEYGRQ GASARVHTEC PYVPDRAR
|
|---|
| |