| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0979 |
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| Symbol | |
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| ID | 4460021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 1203366 |
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| End bp | 1204070 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639701742 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_845110 |
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| Protein GI | 116748423 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAA CCGAATCGAG ACTGTTTTCC GTAAAAGTGT GCTCAGTTGT CCTGTTCCTG
CTCGCGGGGT GCGGGCCGGT GGTCAAGAAC CCGGTGCCCG TCGGTCAACC CGGGACCATT
GCTCCGTATC CCGCCCAGGA ATACACGATC AACTACGGCG ATCAGCTGGA CGTCAAGTTT
TTCTACAACA GTGAGTTGAA CGAACAGATC ATCGTTCGTC CCGATGGCCG GATCGCTTTG
CAGCTGATCG GCGAGGTCTC CGCGGTCGGT TTGACCCCGC AACAGTTGAC CGACCTGCTC
AAGGAGAAAT ACTCGCAGGA ACTGGCCAAG TGCGAACTCA CCGTGATCGT TCGCAACTTC
GGCGGGAACA AAGTGTTCGT GGATGGTGAA GTCACTTCGC CCGGGCTTCA GGACATCGTA
GGGCCGATGA CCCTGAGGCA GGCCATCGCG AAGGCCGGCG GGGTAACGAG AACCGCGCGC
ACGAATGAGA TTATCGTCAT TCGAACGGCC TCGGGGAGAA AGCCCGTGGT GATGACGGCC
GACATCAACA AGGTAAACGA CGGGACGGAC ATGTCCCAGG ACTTCCTCGT GGCACCCCAT
GATATTGTCT ACGTCCCGAG ATCGCCCATT GCAAACCTCA ATCTTTGGGT CGAGCAGTAC
ATCAAGAACA TGACGCCCGT ACCCATCGCC ATACCCATCC TGTAG
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| Protein sequence | MKTTESRLFS VKVCSVVLFL LAGCGPVVKN PVPVGQPGTI APYPAQEYTI NYGDQLDVKF
FYNSELNEQI IVRPDGRIAL QLIGEVSAVG LTPQQLTDLL KEKYSQELAK CELTVIVRNF
GGNKVFVDGE VTSPGLQDIV GPMTLRQAIA KAGGVTRTAR TNEIIVIRTA SGRKPVVMTA
DINKVNDGTD MSQDFLVAPH DIVYVPRSPI ANLNLWVEQY IKNMTPVPIA IPIL
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