| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0978 |
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| Symbol | |
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| ID | 4460020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 1201820 |
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| End bp | 1203349 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639701741 |
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| Product | lipopolysaccharide biosynthesis |
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| Protein accession | YP_845109 |
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| Protein GI | 116748422 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAGA AACCGATCCC TGGAAATCAA GGTGTACCGA CGGCCGCGTC AAACCGCGCT
GTCTCGTTTT ATACGGCTGG TTCGGGGGTT TATGGAAAAC CTCGGCCCTT CAACCTAAGG
GATCTCCTGA TCGTGTTTTT CAAACACAAG TACATGATCA TCTCCATATT TTGCCTCGCG
GTTATTCTTA CCCCGCTGGT CTATTACTTT CTGCCGGCAA AATATGAAGC ATCCTCCACC
TTGATGTTTC GTTACGGCCA GGAGTATCAG AGCCCCATGG TGAGCGGGGA GCAGACTCCC
GTGCGGGTCG GTCTGCAGGA GATTCTCCAT TCCGAATTGG CGATCCTCTC CAGCACGGAC
CTCAAGGAAA GACTCCTGAA GAGCCTGGGG ATTGAAAACA TCTACCCCAA GCTGAGGGCG
TTTTCCGATG AGCCGGTCAA GCAACTCGAA TATGCCAAGG TGTTCTTCGA AAGAGACCTG
CATGTCCAGG CAGGCAGGAA CTCAAACCTC ATTACGGTCA CTTTCCAGAA TGCCGATCCC
GGGACAGCCG CCAAGGTGGT GAATTCACTG GTCGCCGCCT ACATCGCGCG ACGTGTTGAG
ATCCTGCACG ATTCGCGACC GCTGCAGCTG CTCGACAAGA AGGTCGCCGA ATACCTGGAC
AGGTTGAAGA GATCGGAAGG GGAGTTGCAG GCGTTCAAAC AGCAACACCA GGTATTCGCC
TTTGACGAAC AGCGCGACAT GCTGCTCAAG GAGAGAATGA ACCTCGAAAC GACCGCAAGG
ACGACTCAGA GCCTGGTCAA GGAACTGAGG CAGAAGCTGT CCACCCTGGA GAGCCAGCTC
AAAGGCGTCG CCGCGAGCCT GCCCGTCGCC TCCGAAAACG ACCCCAGAAA TGAGCTCGAA
ATGCAACTGG TGACGCTCCA GCGGAGAGAA CAGGAGCTTC TTTCGAAATA CAAGGAAAAC
AATGTGTTTG TGACCAGCGT TCGCAACGAG ATCCAGGTGG TCAAGGGGTT CATCGAGAAG
CAGAAGCAGA CCGCCGCCAG GGGACGGTCC GCAGTGAACA CTCTCTACCA GGACCTGCAG
AAGGAAATCA TCAGCACGAA AGCGGAGGTC AGCTCGCTGG AAGTCAGAAG CAAAGAGCTT
GAAGCCCAAG TCACACTGGC GGACAAGCGA ATCCAGGAAT TCGACCAGCA GGAAAGGACC
GCGCGCGATT TGCAGAGGAC TCTGACGGCC AACGAACAGA TGTATCAATT GTATCAGAAG
CGATTTGAGG AAGCCCGCGT ATCGGAAGAC ATGAGTCAGG ACAAGATGGC GAGCGTCAAC
GTGATCGAGC AGGCGTCGGC TTCCGAATTG CCGATCTGGC CGACCAAGGG CGTGAGCTTC
TACCTGGCCC TCGCCGCGTT CCTGGGGATC GGGGGGGGGC TCACGCTGGC ATTCTCGCTT
GAATTCATCA ACCAGGGGTT GAGCTCACCC CAGAAAACCG AACAGTGTCT GAACATTCCC
GTTTTGACCA CCATTCCCTA CAAAGCATAG
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| Protein sequence | MTQKPIPGNQ GVPTAASNRA VSFYTAGSGV YGKPRPFNLR DLLIVFFKHK YMIISIFCLA
VILTPLVYYF LPAKYEASST LMFRYGQEYQ SPMVSGEQTP VRVGLQEILH SELAILSSTD
LKERLLKSLG IENIYPKLRA FSDEPVKQLE YAKVFFERDL HVQAGRNSNL ITVTFQNADP
GTAAKVVNSL VAAYIARRVE ILHDSRPLQL LDKKVAEYLD RLKRSEGELQ AFKQQHQVFA
FDEQRDMLLK ERMNLETTAR TTQSLVKELR QKLSTLESQL KGVAASLPVA SENDPRNELE
MQLVTLQRRE QELLSKYKEN NVFVTSVRNE IQVVKGFIEK QKQTAARGRS AVNTLYQDLQ
KEIISTKAEV SSLEVRSKEL EAQVTLADKR IQEFDQQERT ARDLQRTLTA NEQMYQLYQK
RFEEARVSED MSQDKMASVN VIEQASASEL PIWPTKGVSF YLALAAFLGI GGGLTLAFSL
EFINQGLSSP QKTEQCLNIP VLTTIPYKA
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