| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0962 |
|---|
| Symbol | |
|---|
| ID | 4461182 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 1181245 |
|---|
| End bp | 1182153 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639701725 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_845093 |
|---|
| Protein GI | 116748406 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.153227 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAATG AAAACCTCCC GCACATTTCG GTATGCATCC CGACTTACAA ACGCCCCGCA
CTCCTCGACA GGTGTTTGAA GGCGCTTCAG AACCAGGAGT GCTCGGGATT CACATACTCG
ATCACGGTTG TCGATAACGA CATCAACGGA TCGGCCTCAG AAACCGTTCA AGGCCGGCAA
AGCCGATCCG CCGTGGAAAT CCGCTACGAT ATCGAGCCCG AGCAGAACAT CTCACTCACC
AGAAACAGGG CCATCGGCAA TTCGAACGGA GAGTTCATCG CGTTTATCGA CGATGACGAG
TTTCCGGAAC CGAGTTGGCT CCAAAAGCTG TTCGACGCTT GCCGAAGGTT TTCGGCTGAC
GGGGTTCTGG GGCCTGTGAT GCCGTACTTC GAAGGCACGC CGCCCGTTTG GCTGGTCAAG
AGCGGGCTGT GCCTGCGCAA ATCCTTCCAA ACCGGAACCC GGTTGAACAA TCCGAGATAC
TTCAGAGCCG GCAATCTTCT GTTTTCCAGG CACATCGTTG AAGGAGAGAC TCTCTGGTTC
GATCCGAGCT TCGGTCGAAC CGGCGGTGAA GATGCGGATT TCCTCGGGAG AATGGCCAAG
CTGGGGCGCA CCTTTGTCTG GTGTGACGAG GCGGTGGTTC ATGAGGAGGT TCCGGAGGAG
CGGCAGACGA GAAGCTACCA CCTGCGGCGA GCCATGATAA GGGGATTGAC TTCTGCAACC
CCCGGGCTGC TTCTGAGCCG TGGGACGCTC AAGTCCGTCG TTGCGGTGAT TGCCTACACG
CTCTCCCTGC CGTTTTTGCT GGTAGCCGGG CATCATCTGT TCATGCGATA CCTGGTCAAG
GATTGTGACC ATCTGGCAAA ACTGTTTGCT TACTGCGGTG TGAAACTGGT CCGCGAGAGA
ACCTTCTAG
|
|---|
| Protein sequence | MSNENLPHIS VCIPTYKRPA LLDRCLKALQ NQECSGFTYS ITVVDNDING SASETVQGRQ
SRSAVEIRYD IEPEQNISLT RNRAIGNSNG EFIAFIDDDE FPEPSWLQKL FDACRRFSAD
GVLGPVMPYF EGTPPVWLVK SGLCLRKSFQ TGTRLNNPRY FRAGNLLFSR HIVEGETLWF
DPSFGRTGGE DADFLGRMAK LGRTFVWCDE AVVHEEVPEE RQTRSYHLRR AMIRGLTSAT
PGLLLSRGTL KSVVAVIAYT LSLPFLLVAG HHLFMRYLVK DCDHLAKLFA YCGVKLVRER
TF
|
|---|
| |