Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0960 |
Symbol | |
ID | 4461180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 1179119 |
End bp | 1179853 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639701723 |
Product | hypothetical protein |
Protein accession | YP_845091 |
Protein GI | 116748404 |
COG category | [S] Function unknown |
COG ID | [COG3394] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.417092 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCCAAG TGAATGCGGA CGATCTGGGC CGGACCGAAA AGATCACCGA TCGAATCATG GCGTGTCACC GCCACGGGAG GATTCACTCC GCGAGCTTGA TGGCTTTCAT GAACGACTCG GAGCGGGCCG CGGCGCTGGC ACGAGAACAT TGCTTGCCCC TCGGACTTCA CCTCAACTTC ACCCAGGAAC TGACCGGTCG GACGGTCTCA GGGAAGTTGC GCGGGCAGCA TCAGCGGGTC GCCGCCTACC TCAAGGCTCG GAAAGCGAGT CAAATTCTGT TCAACCCCTT CCTGTGCAAG GCATTTGATT ACGTTTTCAG GGCACAGTGG GACGAGTTCT CCCGGCTTTT GGGAAAAGCG CCCGCGCGCA TCGACGGACA TCACCACATG CACCTGTGTA TGAACATGCT TCTTCACAAC GGTATCCCGG AAGGATTGAA CGTGAGAAGA AACTTTACCT TCCGTCGTGG CGAGAAGAAC CTCATAAATC GCTATTATCG CCACTTGGTA GATACTTGGT TGTCAAAAAA ATATAAAATC ACGGACGCTT TCTACTCGAT CGCCCCGATT GAATGGGGAA GACTCAATGA GCTGATTCTA TTATCTAAAA ACAGTCATGT CGAAGTAATG GTCCATCCGG GTGTTGACGC TGAATTTTAC TTTTTAACGA GTGATCCTGG TCGGGCTTTT GCCTTGGGTC GTTTCTTGCC GAAATGGTTT CACATGATAA AATAA
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Protein sequence | MLQVNADDLG RTEKITDRIM ACHRHGRIHS ASLMAFMNDS ERAAALAREH CLPLGLHLNF TQELTGRTVS GKLRGQHQRV AAYLKARKAS QILFNPFLCK AFDYVFRAQW DEFSRLLGKA PARIDGHHHM HLCMNMLLHN GIPEGLNVRR NFTFRRGEKN LINRYYRHLV DTWLSKKYKI TDAFYSIAPI EWGRLNELIL LSKNSHVEVM VHPGVDAEFY FLTSDPGRAF ALGRFLPKWF HMIK
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