Gene Sfum_0960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0960 
Symbol 
ID4461180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1179119 
End bp1179853 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content51% 
IMG OID639701723 
Producthypothetical protein 
Protein accessionYP_845091 
Protein GI116748404 
COG category[S] Function unknown 
COG ID[COG3394] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.417092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCAAG TGAATGCGGA CGATCTGGGC CGGACCGAAA AGATCACCGA TCGAATCATG 
GCGTGTCACC GCCACGGGAG GATTCACTCC GCGAGCTTGA TGGCTTTCAT GAACGACTCG
GAGCGGGCCG CGGCGCTGGC ACGAGAACAT TGCTTGCCCC TCGGACTTCA CCTCAACTTC
ACCCAGGAAC TGACCGGTCG GACGGTCTCA GGGAAGTTGC GCGGGCAGCA TCAGCGGGTC
GCCGCCTACC TCAAGGCTCG GAAAGCGAGT CAAATTCTGT TCAACCCCTT CCTGTGCAAG
GCATTTGATT ACGTTTTCAG GGCACAGTGG GACGAGTTCT CCCGGCTTTT GGGAAAAGCG
CCCGCGCGCA TCGACGGACA TCACCACATG CACCTGTGTA TGAACATGCT TCTTCACAAC
GGTATCCCGG AAGGATTGAA CGTGAGAAGA AACTTTACCT TCCGTCGTGG CGAGAAGAAC
CTCATAAATC GCTATTATCG CCACTTGGTA GATACTTGGT TGTCAAAAAA ATATAAAATC
ACGGACGCTT TCTACTCGAT CGCCCCGATT GAATGGGGAA GACTCAATGA GCTGATTCTA
TTATCTAAAA ACAGTCATGT CGAAGTAATG GTCCATCCGG GTGTTGACGC TGAATTTTAC
TTTTTAACGA GTGATCCTGG TCGGGCTTTT GCCTTGGGTC GTTTCTTGCC GAAATGGTTT
CACATGATAA AATAA
 
Protein sequence
MLQVNADDLG RTEKITDRIM ACHRHGRIHS ASLMAFMNDS ERAAALAREH CLPLGLHLNF 
TQELTGRTVS GKLRGQHQRV AAYLKARKAS QILFNPFLCK AFDYVFRAQW DEFSRLLGKA
PARIDGHHHM HLCMNMLLHN GIPEGLNVRR NFTFRRGEKN LINRYYRHLV DTWLSKKYKI
TDAFYSIAPI EWGRLNELIL LSKNSHVEVM VHPGVDAEFY FLTSDPGRAF ALGRFLPKWF
HMIK