Gene Sfum_0958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0958 
Symbol 
ID4461178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1175849 
End bp1177006 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content54% 
IMG OID639701721 
ProductATP-grasp enzyme-like 
Protein accessionYP_845089 
Protein GI116748402 
COG category[R] General function prediction only 
COG ID[COG3919] Predicted ATP-grasp enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAACA CACCAGCGAT CGTTCTTTCC AGCCATACCA TTGGTCTTGG CGTAATTCGC 
GCGCTTGGCA GGATGGGAGT TCCGGTCACG GTTTTCTACT ATCGAGAGGA AGATATGGGA
TACCTCTCCA AGCATGTCCG CCGGAAAGTC AAGGTTCCCA ACCCTGCAAC GGAGACTGCC
GATTTTGTCG CTGCGCTCAT AGACGGGGCG AAACCCTATT CGAAACCGCT CCTCATTCCG
GCGGATGATG AGACTCTCGT TGCCGTATCA CAGCACAAGG CGCAATTGGA GGAGCACTTC
ATTGTGGCCT GCGAAGACTG GGAAACAGTC CAAAGCATCA TCGACAAGAA ATACACGTAT
CGGCTTGCGG AAGCTCACGG CGTCCCTTCA CCGAAGACGT TCGAGGTCGA GTCCCTCGAC
GAGTTGGAAC GCTATGCCGA AATAATGGGG TTTCCACTCA TCATCAAACC GTGCCACAGT
CATTTGTATT TCGAAGTGTT TCGGAAGAAG ATGGTGAAGG CGCACAGCCT GGACGAGGCG
GTTGGCGCGT TCAAAGAGGC CGATGCGCAC GGATTGGCAC TGATGCTCCA GGAGCATATA
CCGGGGGATG ATTCAAGAGG AGTCAACTAC AATTCGTACT TCTGGGATGG AAAACCGCTG
GTGGAATTCA CCGCGGAGAA GGTCAGACTG GCGCCGCCGC GTTTCGGTGT GCCTCGAGTG
CTGGTGAGCA AATACATGCC GGAGGTGATC GACCTCGGGC GCAAAATAGT CCAGGCCGCG
GGGTATCGCG GATACTCCTG CACCGAGTTC AAAAAAGACG TTCGTGACGG TACTTACAAG
TTGATGGAAA TCAATGGGCG CCACAACTTG TCCTCGATGC TTTCCGTCTC GTGCGGGATC
AACTTTCCCT GGCTCGAATA CAAACACCGC GTTGAGGGCG TCCTCCCCGG GCACTGTGAA
TTCAAGACGG GCGCTTACTG GATCGACCTG ACGAAAGACG TTCTTTTCAG CCTCAAGTAC
CTGAGAGAAG AGAGGTACTC CCTGGCCGAG TACTTCAGGC CTTATATGAA ACCCCATGTT
TTTGCCATTT TCGACAGGGG GGATTTGCGC CCCTTTGTGA AAAGATGCTT TGATTTTGCA
AGCAATGCCG CGAAATGA
 
Protein sequence
MPNTPAIVLS SHTIGLGVIR ALGRMGVPVT VFYYREEDMG YLSKHVRRKV KVPNPATETA 
DFVAALIDGA KPYSKPLLIP ADDETLVAVS QHKAQLEEHF IVACEDWETV QSIIDKKYTY
RLAEAHGVPS PKTFEVESLD ELERYAEIMG FPLIIKPCHS HLYFEVFRKK MVKAHSLDEA
VGAFKEADAH GLALMLQEHI PGDDSRGVNY NSYFWDGKPL VEFTAEKVRL APPRFGVPRV
LVSKYMPEVI DLGRKIVQAA GYRGYSCTEF KKDVRDGTYK LMEINGRHNL SSMLSVSCGI
NFPWLEYKHR VEGVLPGHCE FKTGAYWIDL TKDVLFSLKY LREERYSLAE YFRPYMKPHV
FAIFDRGDLR PFVKRCFDFA SNAAK