Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0948 |
Symbol | |
ID | 4460258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 1163677 |
End bp | 1165035 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639701711 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_845079 |
Protein GI | 116748392 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0266805 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAGCG TATTTGTCAT CGAGGACGAT CGCCGTTGGA GAGCGTGCCT TAGGGAAGCG CTCCAACCCA TGCACTCAGT CGTATTTACG TCTGAGAATA CAACCGGTTA CGATTTATTA GCGAGAGAAG CACATGAGGC TGTTATTATC AACCTGGAAG CAATATCATC AAACGGGATC GAAAGACTGA AAGAGCTGCG AAGGGTCCTT CCCTACACGC CCTTGATCGT TACCAGTCCA CTTGGGGCGA CGGAGTTCAT CGTCGAGGCG GTGAAGGCCG GCGCGGTTGA CTTCGTTCCC AAGCCCTATT CCGGAACGAG GATCAAACTG GCGGTCGACA AGGCTCTTGA AAACCGAAGC CTCAGGGATG AGATCGACTA CCTGAGAAGG CAGCAGGATA TTATTTATGA TTTCGATGGG ATAATTGCGG CCAGCGCTTC GATGAAACAT GCGATGTCGA CCATCAGAAA GCTTGCCCAT TCGGATTCCG TCGTTCTCAT GACGGGAGAG ACCGGCACGG GGAAAAGCAT TCTCTCCGGG GCGATTCACT TCAACAGTGC ACGTCGCAGG AAGCCTTTCG TCAAGATCAA TTGCGCCAAC ATACCTGAGG CGCTCCTTGA AAGCGAGCTT TTCGGGCACG AGAAGGGAGC CTTCACCAGC GCGAACAAGA CTCGGGTGGG ACGGCTGGAG CAGGCCAACG GCGGCAGCGT GTTTCTGGAC GAAATCGGGG AGCTCTCCCT GGCCCTGCAG GCCAAATTCC TGCGGGTCCT GGAAGAAAAA GCCTTCGAAC GGCTCGGTGG GAATCAGACG ATTCATAGCG ACATAAGGAT CATTGCCGCC ACGAACAAGA ACCTTGACGA ACAGGTGACA AACGGGGCAT TTCGGGAAGA TCTCTACTAC CGCGTCAATG TGCTCCGAGT CCACTTGCCG CCCTTGCGGA ACAGGCGCGA ATGCATCGAG CCCCTTTCGT ATCATCTCCT GGGCAAGATA TGCCGTACCG CCAGGAAACG AATAGAGGGA TTCCTCCCCG AAGTCATCGC CCTATTCAAA GACTATCACT GGCCCGGGAA CATCCGCGAG CTCTCGAACA CAATCGAACG GTCCGTTTTT CTCGAGGAGA ACAGGGTCAT TCATGCTGAG AACGTGTTCC TGCCTCTTCC CGCTCGCAGG AGCGACAGAA CGGACTCCAC CCTCAAGGAG TTGACCCTCC GGGAGAAGGA AATGATCCTG GATGCACTGG AGGCATGCCA CTGGACGCAG AAAGACGCGG CTTCGATGTT GGGCATCACG CCGCGCATGC TCAATTACAA GGTAAAAAAA TACGGCATAA CCCATCCCAG GTGGCGCAAG AACAGGTGA
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Protein sequence | MASVFVIEDD RRWRACLREA LQPMHSVVFT SENTTGYDLL AREAHEAVII NLEAISSNGI ERLKELRRVL PYTPLIVTSP LGATEFIVEA VKAGAVDFVP KPYSGTRIKL AVDKALENRS LRDEIDYLRR QQDIIYDFDG IIAASASMKH AMSTIRKLAH SDSVVLMTGE TGTGKSILSG AIHFNSARRR KPFVKINCAN IPEALLESEL FGHEKGAFTS ANKTRVGRLE QANGGSVFLD EIGELSLALQ AKFLRVLEEK AFERLGGNQT IHSDIRIIAA TNKNLDEQVT NGAFREDLYY RVNVLRVHLP PLRNRRECIE PLSYHLLGKI CRTARKRIEG FLPEVIALFK DYHWPGNIRE LSNTIERSVF LEENRVIHAE NVFLPLPARR SDRTDSTLKE LTLREKEMIL DALEACHWTQ KDAASMLGIT PRMLNYKVKK YGITHPRWRK NR
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