| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0948 |
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| Symbol | |
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| ID | 4460258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1163677 |
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| End bp | 1165035 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639701711 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_845079 |
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| Protein GI | 116748392 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0266805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGCG TATTTGTCAT CGAGGACGAT CGCCGTTGGA GAGCGTGCCT TAGGGAAGCG
CTCCAACCCA TGCACTCAGT CGTATTTACG TCTGAGAATA CAACCGGTTA CGATTTATTA
GCGAGAGAAG CACATGAGGC TGTTATTATC AACCTGGAAG CAATATCATC AAACGGGATC
GAAAGACTGA AAGAGCTGCG AAGGGTCCTT CCCTACACGC CCTTGATCGT TACCAGTCCA
CTTGGGGCGA CGGAGTTCAT CGTCGAGGCG GTGAAGGCCG GCGCGGTTGA CTTCGTTCCC
AAGCCCTATT CCGGAACGAG GATCAAACTG GCGGTCGACA AGGCTCTTGA AAACCGAAGC
CTCAGGGATG AGATCGACTA CCTGAGAAGG CAGCAGGATA TTATTTATGA TTTCGATGGG
ATAATTGCGG CCAGCGCTTC GATGAAACAT GCGATGTCGA CCATCAGAAA GCTTGCCCAT
TCGGATTCCG TCGTTCTCAT GACGGGAGAG ACCGGCACGG GGAAAAGCAT TCTCTCCGGG
GCGATTCACT TCAACAGTGC ACGTCGCAGG AAGCCTTTCG TCAAGATCAA TTGCGCCAAC
ATACCTGAGG CGCTCCTTGA AAGCGAGCTT TTCGGGCACG AGAAGGGAGC CTTCACCAGC
GCGAACAAGA CTCGGGTGGG ACGGCTGGAG CAGGCCAACG GCGGCAGCGT GTTTCTGGAC
GAAATCGGGG AGCTCTCCCT GGCCCTGCAG GCCAAATTCC TGCGGGTCCT GGAAGAAAAA
GCCTTCGAAC GGCTCGGTGG GAATCAGACG ATTCATAGCG ACATAAGGAT CATTGCCGCC
ACGAACAAGA ACCTTGACGA ACAGGTGACA AACGGGGCAT TTCGGGAAGA TCTCTACTAC
CGCGTCAATG TGCTCCGAGT CCACTTGCCG CCCTTGCGGA ACAGGCGCGA ATGCATCGAG
CCCCTTTCGT ATCATCTCCT GGGCAAGATA TGCCGTACCG CCAGGAAACG AATAGAGGGA
TTCCTCCCCG AAGTCATCGC CCTATTCAAA GACTATCACT GGCCCGGGAA CATCCGCGAG
CTCTCGAACA CAATCGAACG GTCCGTTTTT CTCGAGGAGA ACAGGGTCAT TCATGCTGAG
AACGTGTTCC TGCCTCTTCC CGCTCGCAGG AGCGACAGAA CGGACTCCAC CCTCAAGGAG
TTGACCCTCC GGGAGAAGGA AATGATCCTG GATGCACTGG AGGCATGCCA CTGGACGCAG
AAAGACGCGG CTTCGATGTT GGGCATCACG CCGCGCATGC TCAATTACAA GGTAAAAAAA
TACGGCATAA CCCATCCCAG GTGGCGCAAG AACAGGTGA
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| Protein sequence | MASVFVIEDD RRWRACLREA LQPMHSVVFT SENTTGYDLL AREAHEAVII NLEAISSNGI
ERLKELRRVL PYTPLIVTSP LGATEFIVEA VKAGAVDFVP KPYSGTRIKL AVDKALENRS
LRDEIDYLRR QQDIIYDFDG IIAASASMKH AMSTIRKLAH SDSVVLMTGE TGTGKSILSG
AIHFNSARRR KPFVKINCAN IPEALLESEL FGHEKGAFTS ANKTRVGRLE QANGGSVFLD
EIGELSLALQ AKFLRVLEEK AFERLGGNQT IHSDIRIIAA TNKNLDEQVT NGAFREDLYY
RVNVLRVHLP PLRNRRECIE PLSYHLLGKI CRTARKRIEG FLPEVIALFK DYHWPGNIRE
LSNTIERSVF LEENRVIHAE NVFLPLPARR SDRTDSTLKE LTLREKEMIL DALEACHWTQ
KDAASMLGIT PRMLNYKVKK YGITHPRWRK NR
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