| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0947 |
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| Symbol | |
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| ID | 4460257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 1162318 |
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| End bp | 1163250 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639701710 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_845078 |
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| Protein GI | 116748391 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00385235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGATTGAAA TGGAACATTA TGATTTTGAT ACTGATTTCA GTATACTTAT TGCAGATGAC
GATGAATCTT TTTCCCAGCT TCTTGCTGAT TTGTTATTGT CTCAAAATTT TGATGTAAGA
TATATTCGTG GACCTAAGTA TAATATTGAA CGTATTCTTG AAAGCAAATT TGATATCTTA
TTGCTTGATG TATTTTTAGG AGAAGTCAAT GGTCTCGATT TGATTCCGAG TATTAGATCA
CACTATCCAG ATTGCAGCAT AATCGTCATG ACGGGATATC CTGACAAAGA TATTGCAATA
AAAGCACTAC AACTTGGGGC CTTTGACTTC CTTGAAAAGC CTTTCCCAGG AGAACTGCTG
TTCCATGTTA TTTCACGCAC TATGAAAACC CTCCATGACA AACGTAAAGT GGCGAGACTG
TTCTACGATC TTCACAAGAG TCAAACGGAA CTGATTTCAA ATCAAGAACG ACTGGAGTAT
CTGAACAAGC AGTTGAGAGA GACAAACAAA GCATTGGCTA TTTTTGCACA GAATATTGAA
AGCGAAAAAG ACGATTTGGA GAAGCAGATT GCAGTGAAAC TTAGATCTCT TATCGTTCCT
TCTATTGAGA AGTTGCGAAA CGATAATATT TCTTCACATT ATAATAATCA AATTGATATG
CTTATTAGGC AAGTTGAAGA TCTCACCTCA GATTTCTCAC CGGACGCAAA CCTGGCGTTC
AAGCTTTCCA TTACTGAATT TCGTATTGCA TCCCTCATAA AGCATGGAAA TACCACGGAA
GAAATAGCCA GACAGCTCCA TGTTTCCCCG AGTACTGTTC GATCGCATCG GAAAAATATC
CGGAAAAAAC TGAAGATCAA CAATGCACGA TACAGTCTGA AAAACTTCCT CTATTCCAGC
GAACGCCACA AATTGCAGGG GAATAAGGGA TAG
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| Protein sequence | MIEMEHYDFD TDFSILIADD DESFSQLLAD LLLSQNFDVR YIRGPKYNIE RILESKFDIL
LLDVFLGEVN GLDLIPSIRS HYPDCSIIVM TGYPDKDIAI KALQLGAFDF LEKPFPGELL
FHVISRTMKT LHDKRKVARL FYDLHKSQTE LISNQERLEY LNKQLRETNK ALAIFAQNIE
SEKDDLEKQI AVKLRSLIVP SIEKLRNDNI SSHYNNQIDM LIRQVEDLTS DFSPDANLAF
KLSITEFRIA SLIKHGNTTE EIARQLHVSP STVRSHRKNI RKKLKINNAR YSLKNFLYSS
ERHKLQGNKG
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