| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0942 |
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| Symbol | |
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| ID | 4460252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1156470 |
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| End bp | 1159007 |
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| Gene Length | 2538 bp |
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| Protein Length | 845 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639701705 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_845073 |
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| Protein GI | 116748386 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGACTC AAGCGATCCT GAGCGGCATA TCGCTTTTCA CGGCATGGAT TGCGCTGCTC
GTGCAGCCTG CGCTCTGTCT TGCGGCCCCA TGGGACTTGA CGGCATCGGA CGTCGAAGGA
AGAATCTCCG ACATCTCCTC GACGGCGGCC GTTGCCCTGC TCCTCATCCT CGTAATGGTC
CTCGCTGTCC GGACCCATCG CCGTGCGAAT TCCGCCTGGG GCGAGCCGGA ACCCAAATAC
CGTACCGTCG CGAACCTCAG TTGCGACTGG GAAAGCTGGA CTGCGTCCGA CGGGCGGCTG
CTCTACGTGT CTCCGGCGTG CGAGCGCATT ACGGGATATC GCCCGGGGGA ATTTATCGAA
CAACCGTCTC TGCTTCGCGA AATGATTCTT CCGGAAGACC GCCGACTCTG GGATGAACAT
CGGCACGACG TTCATGCGGA GCAGCCGTCC CGCGAGACCG AGTTCCGCAT CCGCAGGCAT
GACGGCAGCA TTCGCTGGAT CAATCACGCC TGTCGAACGG TAACCGATGA GCGGGGCGAA
TACCTGGGGG TTCAGTCCTG CAATCGCGAC GTCACGCATC TTCACGAGGC GCAGGAAGCT
CTGCAACGGA GCGAAGAGCA ATGCCGCGCC TTCATCGCGC TCAGCACGGA GGGAATTTCG
CTGTGGGAGG TCGACGGTCC CATCCCGACC ACCCTTGCCG AGGATGAGCA GATTGAACGG
TTCTACTGGC ACGCCCGGCT TGCGGAGTGC AACGACGTCT TTGCGCGGAT GTACGGGATG
GGAACGGCCG GCGAGATGCT CGGAGCCCGG CTCGGGGACA TCCTCACGCC CACGGAAACG
GAAAACATTG AATTCCTGCG AAGTTTCATC CGTTCAGGCT ACAACGTCAA GAGCTGCGAA
ACCTATGGCT ACGATCAACT CCGCAATCGT CACAGTTTCC GAACCGGCAT GGTCGGACGG
TGCGTCGACG GACGCCTGGT CGAGGCATGG AGCATCCAGC ACGATATGAC GGACCTGGCG
CGCCTGCACC GGCAGGTCCG GAGAGCCGAC GACGAATGGC AGACGACTTT CGATTCCATC
GCAGACCCGA TCATGATCCT GGACCGCGGG TTTCGAATCC TGCGCGCCAA TCCCGCAGCG
GCAGCCTTTT TGAATGTCGC GCCCGTCGCG ATTCCCGGGA AACACTGCTA CACCCTGATG
CACGGGAAGG ACTCGCCCGT TCCCCTGTGT CCCGTGAGGG CGATGATGAA AACCGGGATC
CATACGGAGA CGGAGCTATA CGACGAAAAA CGCAAGGCAT GGTTCCTCGT CTCCGCCGAC
CCGCTGCCGG GCCCTGAGGG TGAGGTCGCC GGGGCCGTTC ACACCGTAAA GAACATCACC
GAAAGCAAGA TAACCCGGGA CGCCATCCGC GATTCCGAAG CCTTCAATCG GAGCATCCTC
GCCTCTCTCA ACGATCGTAT CGCGATCATC GACGGCAACG GCGTCATCCT CGCCGTCAAT
GCGGCCTGGG AAAGGTTTGC CGCGGAAAAC GACACCTCGT CGCCCCCCCG GGTCGGCGTG
GGGATCAATT ACCTGGACGT TTGCCACCGG GCGGTCCAGA CCCGCGACGA TCTTGCGGAA
CAGGCGCTCA GAGGAATCCG ATCGGTGCTC AACGGCAGGA AGGAGTCTTT TTCGTTGGAG
TACCCCTGCG ACGCCCTCTC CGAAAAACGG TGGTTCGCCA TGAGGGTCAT GCCTTTCAAG
AGGGCGGGAG GCGGAGCGGT CATCTGCCAC GCCGACGTTA CGGAACGAAA AAGGGCGGAA
GATGAAGCGC GCCGCCGGAT GATCGAGCTG GCCCACGTCA CGAGGGTTGC AACGCTCGGG
GAACTGGCCG CATCCCTCGC CCATGAAATC AACCAGCCGC TGACGGCAAT CCTGTCGAAC
GCGCAGGCCG CCCAGCATTT TCTGGCCAGG GAGGTGCCGG AAACGGATGA GATCCGGCAG
ATCCTCGACG ATATCATCGA GGATGATAAA AGGGTCAGCG AAGTCATCCG GAGAATGCGT
TCCCTTCTCA AGAAAGGGGC GGCCTCACAC GAGCGGGTGA ACATCCATGA CGCCGTCCTG
GAAAGCGTGG CCCTGATCGA AAGCGCTTCG CTGCTCAACG GATTGTCCAT CACCACCGAA
TTCGACGCCG GAATGCCCAT CGTGTGCGCG GACCCGGTCC AGCTGCAGCA GGTCCTCTTC
AACCTGATGG TGAATGCGGC GGGCGCCATG AAAAACACGC CCAATCCTTC GAGGAAAATC
CGGATAGGAA CGCTGTTAAG GGACGAGCGG ACCGTGCAAC TCTCCGTCAC GGACTCGGGC
ACGGGTATCG ACGAGGCCGT GATGGCTCAT CTCTTCGAGC CCTTCGTCAC GACCAAACCG
GGAGGCATGG GCATGGGACT TTCCATCAGC CAGACCATCA TCAAGGCCCA CGGTGGGACC
ATCGGGGCGA AGAACAACCC GGAGGGAGGC GCCACCTTCT TCTTTTCCCT TCCTCTGGAC
AAGGAAAGCC GGTCATGA
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| Protein sequence | MGTQAILSGI SLFTAWIALL VQPALCLAAP WDLTASDVEG RISDISSTAA VALLLILVMV
LAVRTHRRAN SAWGEPEPKY RTVANLSCDW ESWTASDGRL LYVSPACERI TGYRPGEFIE
QPSLLREMIL PEDRRLWDEH RHDVHAEQPS RETEFRIRRH DGSIRWINHA CRTVTDERGE
YLGVQSCNRD VTHLHEAQEA LQRSEEQCRA FIALSTEGIS LWEVDGPIPT TLAEDEQIER
FYWHARLAEC NDVFARMYGM GTAGEMLGAR LGDILTPTET ENIEFLRSFI RSGYNVKSCE
TYGYDQLRNR HSFRTGMVGR CVDGRLVEAW SIQHDMTDLA RLHRQVRRAD DEWQTTFDSI
ADPIMILDRG FRILRANPAA AAFLNVAPVA IPGKHCYTLM HGKDSPVPLC PVRAMMKTGI
HTETELYDEK RKAWFLVSAD PLPGPEGEVA GAVHTVKNIT ESKITRDAIR DSEAFNRSIL
ASLNDRIAII DGNGVILAVN AAWERFAAEN DTSSPPRVGV GINYLDVCHR AVQTRDDLAE
QALRGIRSVL NGRKESFSLE YPCDALSEKR WFAMRVMPFK RAGGGAVICH ADVTERKRAE
DEARRRMIEL AHVTRVATLG ELAASLAHEI NQPLTAILSN AQAAQHFLAR EVPETDEIRQ
ILDDIIEDDK RVSEVIRRMR SLLKKGAASH ERVNIHDAVL ESVALIESAS LLNGLSITTE
FDAGMPIVCA DPVQLQQVLF NLMVNAAGAM KNTPNPSRKI RIGTLLRDER TVQLSVTDSG
TGIDEAVMAH LFEPFVTTKP GGMGMGLSIS QTIIKAHGGT IGAKNNPEGG ATFFFSLPLD
KESRS
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