| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0936 |
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| Symbol | |
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| ID | 4460351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 1151036 |
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| End bp | 1151986 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639701699 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_845067 |
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| Protein GI | 116748380 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAAAA CGGGTTTCCT ATACGACGAT CGGCTTCTGC TTCACTGCAC GGGCTCGAAT
CATCCCGAGT CGCCGGAGAG GCTGGAGGCG GTCTACCGAG GCGTGGAAGA AGCCGGGCTT
TTTCCCAGGC TCACCCTGAT AAAAGCGAGT CCGGCGAAGT TGAAGTGGAT CGAAGCGGTT
CACTCGCCCA AACACATCAT GCGGTTCGAA GAGGCGTGTC TCCTGGAGAT GGGAGAATTC
GACCATCCCG ACAACCAGAT GTGCCGGGAA AGCTACGAGA CGGCGCTTCT TGCCGTCGGG
GGCCTGCTCG AGGCGGTCAG GATGGTGATG GAGGGAATAA TCGACAACGC CTTCTGCGCG
GTGCGCCCTC CGGGCCACCA TGCCGAAATG AATCGCGCTC TCGGTTTCTG CTACTTCAAC
AATGTGGCGA TTGCCGCGCG GTACCTCCTC AACGAATGGG GAGTGGAGCG GGTCGGAATC
GTGGACATCG ACGCCCATCA CGGCAACGGC ACGCAACACA TCTTCGAAGA CGATCCCAGC
GTGTTTTATT ATTCCGCCCA TGAACATCCT TCCTTCGCGT TTCCCGGGAC CGGTCGTGAA
TTCGAGACGG GAGTCGGCGC GGGTTCCGGG TTTACGCTCA ATTGCCCTTT GCTGCCCGGG
CAGGGCGACG AGGAATACAT GGCCATTCTG GAAAGGGATT TGGCGCCTGC GTTCGCCGAA
TTCAAGCCGC AGGTCATTCT TGTGTCGGCA GGTTTCGATG CGCACGTGGG TGACGATATG
TCCGACCTGA AGCTCTCGAC GGAAGGTTTC TCCCGGATCA TGCGCAAGCT GGTGGAATTG
GCGGACGCAT ATTCGGCGGG AAGGATCATC TCCGTTCTCG AAGGGGGTTA TTCGGTCCAG
CTCCTGCCGG AACTGATAAG GAATCATGTC TCAATTCTGC TGGGCCTGTA A
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| Protein sequence | MRKTGFLYDD RLLLHCTGSN HPESPERLEA VYRGVEEAGL FPRLTLIKAS PAKLKWIEAV
HSPKHIMRFE EACLLEMGEF DHPDNQMCRE SYETALLAVG GLLEAVRMVM EGIIDNAFCA
VRPPGHHAEM NRALGFCYFN NVAIAARYLL NEWGVERVGI VDIDAHHGNG TQHIFEDDPS
VFYYSAHEHP SFAFPGTGRE FETGVGAGSG FTLNCPLLPG QGDEEYMAIL ERDLAPAFAE
FKPQVILVSA GFDAHVGDDM SDLKLSTEGF SRIMRKLVEL ADAYSAGRII SVLEGGYSVQ
LLPELIRNHV SILLGL
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