| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0935 |
|---|
| Symbol | |
|---|
| ID | 4460350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 1150310 |
|---|
| End bp | 1150987 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639701698 |
|---|
| Product | CBS domain-containing protein |
|---|
| Protein accession | YP_845066 |
|---|
| Protein GI | 116748379 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3448] CBS-domain-containing membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.872585 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTATCG ACAAGTCGAT GACGAAGAAA GTAGTCACGG TCGGCCCGAA CGACGGGATC
CTGGAAACCA GGGAACTCCT GGCCAAGAGC AGCTTCCGCC ATCTCCCCGT GGTGGATGAA
GAGAACCGAC TGGTTGGAAT CGTGACGGAC CGGGATATTC GCAGCGCCAT GCCGTCGGTG
TTTCTGGACG AGAATGAAAC CCTGAAGGAG CGCGAGCGCC TCGCTCAGAT GAAGATCAAG
GACATCATGA CCAAAAACCC CGTCACGGTT AATCCCGCGA ACACCCTGGA GGACGCCATC
CTGCTGATGC AAAGGATGCG AGTGGGGGCG TTTCCGGTTG TGGATCGGGA AGGGAAGCTG
CGCGGAATGC TCTCCATCCG CGACCTTGTG CGAGCTTTTG TCAACGTCCT TGGCCTGGAG
GAGCCCGGAA CCCTGCTTTG CATCAAGGTG CAGGAGCGCG TCGGGGAAAT GAAGAAGATC
GTGGACGCCA TCACCGAGGA ACACATCTCC TTCGGCAGCA TATTGGTCAG CCGGTACTGG
GAGGAGGGGA AGCGGGCCGT GTTCCCGTAT CTCTTGACCA CAAACGTGGC CCACGTCAAA
CGAAAGCTGG TCGAGATGGG CTACGAGTTG ATCGATCCCA TGGAATGGAC TCTGGATGCT
CTGCCCAGGC CGGAATGA
|
|---|
| Protein sequence | MFIDKSMTKK VVTVGPNDGI LETRELLAKS SFRHLPVVDE ENRLVGIVTD RDIRSAMPSV
FLDENETLKE RERLAQMKIK DIMTKNPVTV NPANTLEDAI LLMQRMRVGA FPVVDREGKL
RGMLSIRDLV RAFVNVLGLE EPGTLLCIKV QERVGEMKKI VDAITEEHIS FGSILVSRYW
EEGKRAVFPY LLTTNVAHVK RKLVEMGYEL IDPMEWTLDA LPRPE
|
|---|
| |