Gene Sfum_0933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0933 
Symbol 
ID4460348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1147909 
End bp1148904 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content61% 
IMG OID639701696 
Product3-oxoacyl-(acyl-carrier-protein) synthase III 
Protein accessionYP_845064 
Protein GI116748377 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCGCA GTGTTGTCGC CGGAATAGGA AGCTATGCTC CTCCGAAAAT CGTGAAGAAC 
GATGACCTTG CACAATTGAT GACGACCAGC GACGAATGGA TCAGGACCCG GAGCGGCATC
GAGGAACGAC GGTTTGCCGA CGAGGGGGTG TACTGCTCCG ACCTGGCGCT GGACGCGGCG
AAAGCTGCGC TTGAAGATGC GTCTTTGCAG CCTTCGGACA TCGATTTCAT CATTTTTGCG
ACGTTGAGCC CCGACCAGTT TTTCCCCGGC GCCGGGTGTT TTCTCCAGGC CAAGCTCGGC
ATCCAGTCCA TCGGCTGCCT GGACGTGCGC AACCAGTGCA CGGGTTTCAT CTATGCGCTG
GCGACGGCGG ACGCGTTCAT TCGCTCGGGC GTGTACCGGC GCGTCCTGGT GGTGGGTTCC
GAGGTGCAGT CGGGAGCGTT GAATTTCAGT GACGGCGGGC GGGACGTGGC CGTTCTTTTC
GGGGACGGCG CGGGCGCGGT GGTGCTCGAA GCCGCGGAGG AGAACAGCAG GGGTATCTTG
TATTCCGAGC TGCACGCCGA CGGAAGGTTC GCCAAGGCGC TTCATCTCAC CATGTATGAC
ATTTCCCGCA AACCCATCGT GACCCCGAAG ATGATCGAGG ACGGTGCACT CTGGCCGCAG
ATGGACGGCA GACTGGTGTT CAAGCACGCC GTGGTGCGCC TGGGAGAAGT GATCGTGAGC
ACGCTCAGAA AGTGCGGCAT CGACCCCGCC GAGATCAAGT ACGTCATTCC TCACCAGGCG
AACCTGCGCA TCAACAACAT GGTGGCGGAA CGGCTGGGAA TACCGCAGGA GAAGTTCCTG
AGCAATATCC GGAAGCACGG CAACACCACC GCGGCATCCA TTCCCCTGCT GCTCGATCAA
ACCTACCGTG CCGGAAAGCT GGAACGGGGC GACCTGCTCC TGCTCGCGGC ATTCGGTTCC
GGATTCACCT GGGGGACGAC GCTGTTGCGG TGGTAA
 
Protein sequence
MVRSVVAGIG SYAPPKIVKN DDLAQLMTTS DEWIRTRSGI EERRFADEGV YCSDLALDAA 
KAALEDASLQ PSDIDFIIFA TLSPDQFFPG AGCFLQAKLG IQSIGCLDVR NQCTGFIYAL
ATADAFIRSG VYRRVLVVGS EVQSGALNFS DGGRDVAVLF GDGAGAVVLE AAEENSRGIL
YSELHADGRF AKALHLTMYD ISRKPIVTPK MIEDGALWPQ MDGRLVFKHA VVRLGEVIVS
TLRKCGIDPA EIKYVIPHQA NLRINNMVAE RLGIPQEKFL SNIRKHGNTT AASIPLLLDQ
TYRAGKLERG DLLLLAAFGS GFTWGTTLLR W