Gene Sfum_0916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0916 
Symbol 
ID4460313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1128832 
End bp1129677 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content58% 
IMG OID639701679 
Producthypothetical protein 
Protein accessionYP_845047 
Protein GI116748360 
COG category[L] Replication, recombination and repair 
COG ID[COG3359] Predicted exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.58478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAAA ACACTTTCTG TCACCTGCCG GGGATCGGCT TTCGCACGGA ACGGCAGCTT 
TGGGACCGCG GCGTTCATTC CTGGGACGTT TTCCGGACGG AATCCACTCC ACTCCCCTTT
GGAAAAGCCA GGGCGGCCGC TCTCAGAAAA GACCTGGGGC ATTCGCTGGC GCATCTGCGC
GAAACCGACG CGCGGTTCTT CGCCGAGAGG CTCCCTTCGG ACCTGCACTG GCGGTTGTTC
CGGGATTTCA GGCATTCCAC CGCCTACCTG GACATCGAGA CGACCGGTCT CGGGTATCCC
GACGATCACA TCACCACCAT TGCGCTTTAT GACGGGAAAT CCCTGCGCAC TTACATCCAT
GGGGACAATC TCCACCGGTT CGCCGCCGAC ATCGCCCGCT TCGAGCTGAT CGTCACGTAC
AACGGGAAGT GTTTCGATCT TCCTTTCATC AGGGATTTCC TGGAAGTCGA ACTGGATCAG
GCCCATATCG ATCTCCGCTA CGTCCTGAGA AGTCTCGGGT ATTCAGGGGG GCTCAAGGGC
TGTGAGAGGC AGATCGGAAT CTGCAGGGAC ACACTGGAAG GCGTGGACGG TTATTTTGCG
GTTCTGCTCT GGCAGGAGTA CGTCGAGCGC AACGACATGA AGGCGCTGCA GACCCTCCTG
GCATACAACG CCATGGACAC GGTCAACCTG GAAAAGCTCA TGGTTCTCGC CTACAACCTG
AAGCTGCGGG ACACCCCGTT TCCGGAGCTG AGGATCGACG AGGACCCCGC TACGCCGGAT
ATTCCTTTCG AGCCCGACAT CGATACGATC AACCGGATCA GGCATCGTTT TTTCGGGTAT
GCCTGA
 
Protein sequence
MLQNTFCHLP GIGFRTERQL WDRGVHSWDV FRTESTPLPF GKARAAALRK DLGHSLAHLR 
ETDARFFAER LPSDLHWRLF RDFRHSTAYL DIETTGLGYP DDHITTIALY DGKSLRTYIH
GDNLHRFAAD IARFELIVTY NGKCFDLPFI RDFLEVELDQ AHIDLRYVLR SLGYSGGLKG
CERQIGICRD TLEGVDGYFA VLLWQEYVER NDMKALQTLL AYNAMDTVNL EKLMVLAYNL
KLRDTPFPEL RIDEDPATPD IPFEPDIDTI NRIRHRFFGY A