Gene Sfum_0901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0901 
Symbol 
ID4460333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1109257 
End bp1111107 
Gene Length1851 bp 
Protein Length616 aa 
Translation table11 
GC content60% 
IMG OID639701664 
Productphosphoenolpyruvate carboxykinase 
Protein accessionYP_845032 
Protein GI116748345 
COG category[C] Energy production and conversion 
COG ID[COG1274] Phosphoenolpyruvate carboxykinase (GTP) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGAAT TCCAACTGAC CGGTGGCAAG ACCAATCACG AGGCAATGCT GAGATGGATT 
CAGGAAACAG CGCGACTTTG CAAACCGGAT CGCGTTCATC TTTGCGACGG CTCGGAGACG
GAAAACCGGG AATTGTGCGA TCAGATGGTG CGATCGGGCA CCTTTATCCG CCTCAATGAG
GAAAAGCGTT CCAACTGCTT CCTGTGCCGC TCCGACCCGG CGGACGTGGC CAGGGTGGAG
AGCCGTACCT TCGTGTGCTC GAACAGCAAG AACGCCGCCG GCCCCACCAA CAACTGGATG
CATCCCCGGG AGATGAAAGA AATTCTGAAC GGACTGTTCG ACGGGTGCAT GCGCGGTCGC
ACCATGTACG TCATCCCCTT CAGCATGGGG CCGCTCGGTT CGCACATCGC TCATATCGGC
GTGCAGATCA CCGATTCCCC TTATGTTGTG GTCAGCATGC GGATTATGAC CCGCATGGGG
CAGGGGGCTC TCGATGTCCT GGGCCGCAAA GGGCCTTTCG TGCGCTGTTT CCATTCCGTC
GGATCTCCCC TCGAACCGGG CGGGAAGGAT GTCCCGTGGC CCTGCAATCC CGCCAACACT
TATATCTCGC ATTTTCCCGA AGAGCGCGCG ATCTACTCCT TCGGCAGCGG CTACGGCGGG
AACGCTCTGC TGGGCAAGAA GTGCTTTGCA TTGAGAATCG CCTCGTGCAT GGCCCGGGAC
GAAGGCTGGC TTGCCGAACA CATGCTCATC GTCGGGGTGC AAAGCCCGCG GGGGGAAAGA
ACCTATGTGG CCGGAGCGTT CCCGAGCGCA TGCGGTAAGA CCAATTTCTC GATGATGGTG
CCTCCGAAGG GCTTTGAAGG CTGGAAGGTC TTCACCATCG GGGACGACAT CGCCTGGATC
AAGCCCGGGG CGGACGGGGC GCTGCGAGCC ATCAATCCCG AGGCGGGCTT TTTTGGCGTC
GCCCCCGGGA CGTCCATGAA GTCCAACCCC AATGCCATGA TGACCTTGAA CAAAAACTGC
ATCTTCACCA ACGTCGCACT GACCGACGAT GGAGACGTCT GGTGGGAGGG GATGACCGAC
GATCCCCCTT CCCATTTGAT CGACTGGACC GGAAAGGACT GGACGCCGGG GTGCGGACGG
GTCGCCGCTC ACCCGAATTC CCGTTTCACC GCTCCCATAT CCCAGTGCCC CACCTTCGAC
CCCAACTGGG ACAACCCCGA CGGTGTTCCC ATCAAGGCCT TCATTTTCGG TGGGCGCATC
AGCAAGAACG TTCCCCTCAT ATTTCAGGGG TATAACTGGA CTCATGGAGT ATACCTCGCG
GCCACGATGG GTTCCGAGGC CACTGCCGCC GCGGAAGCCA CGCTCCCGCC GATGAGAAGG
GATCCGATGG CCATGCTGCC TTTCTGCGGC TACAACATGG CCGAATACTG GAACCACTGG
TTGGACATCG GACGTCAACT GCCGGATCCT CCCCGCATTT TCCGCGTCAA CTGGTTCCGG
CGCGACAAGC AGGGCAAGTT CCTGTGGCCC GGCTTCGGCG AAAACATGCG CGTTCTCAAG
TGGATCGTCG ATCGCGTGCA CGGCAGGGGA TACGGTGTGG AGAGCCCGTT GGGGTACGTT
CCGCGCTATC AGGACATCGA GTGGGAAGGC CTGGACCTGG ATCCGGACCT CTTCTGCGAG
TTGATGACGG TGGAGCGCGA GCAGGCCATC ATCGAGGCCA GGTCCCACGA GGACCTTTTC
GACAAGTTCT TCGATCGTCT TCCCAAGGAA TTCGTCCACA CCCGGGAGCT GTTCAAGTCG
AGGGTCTGGC GGTCTCCCGA AATATGGAAC CCGGGGAACG GGGTCTGCTG A
 
Protein sequence
MKEFQLTGGK TNHEAMLRWI QETARLCKPD RVHLCDGSET ENRELCDQMV RSGTFIRLNE 
EKRSNCFLCR SDPADVARVE SRTFVCSNSK NAAGPTNNWM HPREMKEILN GLFDGCMRGR
TMYVIPFSMG PLGSHIAHIG VQITDSPYVV VSMRIMTRMG QGALDVLGRK GPFVRCFHSV
GSPLEPGGKD VPWPCNPANT YISHFPEERA IYSFGSGYGG NALLGKKCFA LRIASCMARD
EGWLAEHMLI VGVQSPRGER TYVAGAFPSA CGKTNFSMMV PPKGFEGWKV FTIGDDIAWI
KPGADGALRA INPEAGFFGV APGTSMKSNP NAMMTLNKNC IFTNVALTDD GDVWWEGMTD
DPPSHLIDWT GKDWTPGCGR VAAHPNSRFT APISQCPTFD PNWDNPDGVP IKAFIFGGRI
SKNVPLIFQG YNWTHGVYLA ATMGSEATAA AEATLPPMRR DPMAMLPFCG YNMAEYWNHW
LDIGRQLPDP PRIFRVNWFR RDKQGKFLWP GFGENMRVLK WIVDRVHGRG YGVESPLGYV
PRYQDIEWEG LDLDPDLFCE LMTVEREQAI IEARSHEDLF DKFFDRLPKE FVHTRELFKS
RVWRSPEIWN PGNGVC