| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0899 |
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| Symbol | |
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| ID | 4460331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 1105884 |
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| End bp | 1107587 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639701662 |
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| Product | TrkA domain-containing protein |
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| Protein accession | YP_845030 |
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| Protein GI | 116748343 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTTT TGACCACTCA GCTGTCTTAC CTTCTCAGTC AGCAGCAGAC CCGCAGAAAT
CTGAAGGCAC TGCTCAAATT CGTCCTTTTT CTCACGGCGG TCGTCCTGCT TTACGCCGTT
GTTTTTCACT GGATCATGGT CACCATCGAA AAAAGAGACC ACTCGTGGCT CACGGGCATC
TACTGGACCC TCACCGTGAT GAGCACTCTG GGGTTCGGCG ACATAACCTT TCACAGCGAT
GTGGGACGCG CCTTCAGTAT CGTGGTGCTG CTCTCGGGGA TCGTGCTGCT TTTGATCGTG
CTTCCGTTCG CTTTCATCCG ATTCTTTTAT GCTCCTTGGC TGGAAGCCCA GATGCGTCTT
CGTGCTCCCC GTGAGGTTCC CCATGACATG AGCGGGCATG TGATCATCTG CCGCTACGAG
ACCGTGGCGC AGGGGCTCAT CCGAAAGCTC AAGGCTTTCA GGATACCCTA TTACGTGCTG
GAACCGGACG CCACGCTGGC GGCAAACCTC TACGAGGAGG GAGTCTCAGT CGTTACGGGA
GAGGTCGACA ACAGCACGAC CTACGCTGCT CTTCGAGCCT CCGAGGCGCG AATGGTGCTT
GCCAATGCGG ACGACGCCAC GAATACGAAC ATCACGCTGA CAGTGCGGGA AACAGCGGCG
AAGGCGCCGG TTGTTGCCAT TGTGGAAAGT ATCGATTCCG TGGACATCCT GGAGTTGGCT
GGAGCGACGC ACGTCCTGCC TTTGAAACAG AGACTCGGCG AGCACCTGGC CTACCGGGTC
ACAGCGGAAC GAACCAATGT GCATGTCATC GGCACGTTCA GAGATCTGCG CATCGCCGAG
TTCCCCGTAC AGAATACCCC TCTGGCCGGG TGCATGATTC GAGAGACGCG GCTTCGACAG
CGAACCGGGG TCAACGTGGT GGGGGTCTGG GAGCGCGGGC ACCTGTTGCC GGCCAAGCCG
GATACGGTGC TGGCTGAATC GAGTGTGCCG GTGATTTTGG GGACGGCCGG GCAGATCGCC
GACATGGAAT CTTTCCTGGT AACCGAGAAC GTCAATCGCA ATCCCATTCT TGTCATCGGC
TGCGGCAATG TGGGCTACGC CGTCACGTGT GCTCTCAAGA ACAAGAGCCT CGCGTTCCAT
GTGGTCGAGC GCGACAAAGC CGTCGAGGAA CGCTCCTCAT CCATCGCAGG CGAATTGTTC
ATCGGCGATG CGGCAGACCG GAGCGTTCTC ATGCGCGCCG GTCTGGCGGA GGCTCCTTCC
GCCGTCATCA CCACCAACGA CGATGCCATG AACATCTATC TGACCGTGTA CTGTCGTCGC
CTGAATCCTC GTCTTCGCAT CGTCAGCCGC ATTACCCATG AGCGGAACCT CGAGGCCATT
CATCGCGCCG GCGCCGATTT CGTCCTGAGC TATGCATCTC TGGGAGCGGA ATCGATCTTC
TCCATCTTGC AGGAGCGGGA GTTGATCATG CTGGGGGAGG GGATCGACCT TTTCGTGGCC
AAGGTGCCCG AATCCCTGGC GGGAAAAAGC CTCGGAAAAA CCAACATAGG CGCAGAGACC
GGATTGACCG TGATCGCGAT TCAGAAAGGC GGAGATGTCG TCACGAATCC TCCTGCAAGC
GCCGTCATCG ACTCGGATAG CGAGCTTCTC ATGATCGGAA GCAGTGAACA ACGTGATGAG
TTTGCAGCCC GGTTTGGGGT TTGA
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| Protein sequence | MKLLTTQLSY LLSQQQTRRN LKALLKFVLF LTAVVLLYAV VFHWIMVTIE KRDHSWLTGI
YWTLTVMSTL GFGDITFHSD VGRAFSIVVL LSGIVLLLIV LPFAFIRFFY APWLEAQMRL
RAPREVPHDM SGHVIICRYE TVAQGLIRKL KAFRIPYYVL EPDATLAANL YEEGVSVVTG
EVDNSTTYAA LRASEARMVL ANADDATNTN ITLTVRETAA KAPVVAIVES IDSVDILELA
GATHVLPLKQ RLGEHLAYRV TAERTNVHVI GTFRDLRIAE FPVQNTPLAG CMIRETRLRQ
RTGVNVVGVW ERGHLLPAKP DTVLAESSVP VILGTAGQIA DMESFLVTEN VNRNPILVIG
CGNVGYAVTC ALKNKSLAFH VVERDKAVEE RSSSIAGELF IGDAADRSVL MRAGLAEAPS
AVITTNDDAM NIYLTVYCRR LNPRLRIVSR ITHERNLEAI HRAGADFVLS YASLGAESIF
SILQERELIM LGEGIDLFVA KVPESLAGKS LGKTNIGAET GLTVIAIQKG GDVVTNPPAS
AVIDSDSELL MIGSSEQRDE FAARFGV
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