Gene Sfum_0887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0887 
Symbol 
ID4460319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1096323 
End bp1097594 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content61% 
IMG OID639701651 
Producthypothetical protein 
Protein accessionYP_845019 
Protein GI116748332 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCCGA ATCCGGGGCG AACCCCGCCT TCGATTCCCC GGCCCGGCCT GCACGTTCGA 
AGGGTTCCCC GGCAGCCGGC GGGCACGCAC CGGCGGGGTA AACCACCTTT ATTTGACTTT
TGCAGGGGAC GGCCAGAGCG AAAACCCCGG CGGAGGCTTA ACCGCAAAGC CTTCATCCGC
GCGTCCATCA TCCCGCTGCT CGACGACGGA GGAAACTTGA TCATGGTGAA AAGAATTTTG
ACCGCACTCT CTGTTCTGTT GATGCTCGTC TCTTATTCCA CCGCCTGGGC CACGCCCCTG
GGCGGCCTGG CGGTGGCGCT GTCCCCGACG GAAAACGTGA TGGTTGCCGC CGGCGACAAC
CGCGTGCTCT ATGTGATCGA TCCGGCCAAG ATGGAGGTCC TCAACCGGGT CTGGCTCGGA
GTGTGCATCA TCGAACTGGA ATTCAACAAG GACGGGACCA TGTTGCTGGC GGAAGACACC
GACGGCACGC TCCACCAGGT GGACGCCAAG ACGTGGAAGA CGGTCAAGCA GGCGCCCAAG
GCCTCGCGAA TGAGCGCCGC GCGCAACGTC GATCTCGCGG CCGGATTGAA TCCGGACAGC
AACGGCCACA TCGTTCGATT GCTGTCCATG ACCGATTTGA GCGAAAAAGG CAAAGTCGTG
CTCGCCAAAG GGGAGAAAGT CACAGCCCTG GGCCTCGATC CCGAGGGGGC GCGCCTGGCG
GTTCTGTTGG AAGCCGTCAA TGACGAGTCG GAACCGAAGG CCACCGCCAC GCCGCCGGAG
CTCAAGGGAC TGGCGGCCGA TGAGTTCCGC CAGAAAAACG ACGGCAAGAC TTCCCGGTTT
ATGGTCTACA AAGTCGCCGA CGGCTCGAAG ATCACCGAAC ACAAACTCTT CTACTCCACG
TCGAGCACCG GCTGGAAGGT CCTGTTCCAG GGCGAAAACG TCCTCTTCAT AAACTACTCC
AACATGAACG CCCGGGTGAA CGCGAAGGGC GAAGTCACCC TCTTCCAGCT CGCCAACAGC
TTCAACTACG GCATCGGCGC TTCCGCCGAC CAGAAGCTTC TGCTGACCGG AGGACTCTCC
GACGGAAGCT ACACCGCAAC CGAGGGCCTG AGCCCGCTGA AGTTCCAGCC GGATCGCCTG
TCGGGTTGGC CGGAATACTT CAAGAAATTT GCCGTCGCCG CCGACGGCAC CGCCTATGGT
TCCACTTCGG CTTTCCGCAT CATCAAGATC AAGCCCGGGG GTTCATTCGA CAGGAGCTTC
CCGATTTTCT AG
 
Protein sequence
MTPNPGRTPP SIPRPGLHVR RVPRQPAGTH RRGKPPLFDF CRGRPERKPR RRLNRKAFIR 
ASIIPLLDDG GNLIMVKRIL TALSVLLMLV SYSTAWATPL GGLAVALSPT ENVMVAAGDN
RVLYVIDPAK MEVLNRVWLG VCIIELEFNK DGTMLLAEDT DGTLHQVDAK TWKTVKQAPK
ASRMSAARNV DLAAGLNPDS NGHIVRLLSM TDLSEKGKVV LAKGEKVTAL GLDPEGARLA
VLLEAVNDES EPKATATPPE LKGLAADEFR QKNDGKTSRF MVYKVADGSK ITEHKLFYST
SSTGWKVLFQ GENVLFINYS NMNARVNAKG EVTLFQLANS FNYGIGASAD QKLLLTGGLS
DGSYTATEGL SPLKFQPDRL SGWPEYFKKF AVAADGTAYG STSAFRIIKI KPGGSFDRSF
PIF