Gene Sfum_0886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0886 
Symbol 
ID4460318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1094392 
End bp1096287 
Gene Length1896 bp 
Protein Length631 aa 
Translation table11 
GC content61% 
IMG OID639701650 
Producthypothetical protein 
Protein accessionYP_845018 
Protein GI116748331 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.57162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGAA AGTACTTCCT GGTTTTTGCC ATGGCACTGT TGGCCTGTTT TCTGATTTCT 
TCCTCCTCCG GGGTGGTCCG GCAGGCGCAA GCCGCATACG TGACGGAAAT CACCGTGGAC
AGCACCGAGG ACTGGTATGC GGACGGCAAC AGCAAGACTT GCATCAGCGA CACACCGTGT
ACGCTGCGCA GGGCGATCAA CCAAGCCTAT CAGCTTGCGG CCGGAGAGCG GCCCGTCCTC
ATCAAGTTTG GCATCCCCAC ATCGGACGCC AACTACGACA GTACTTTGCA GACATGGAAG
ATCACCCTGA CAGGCACGAC GAGTTATCCG CTGCGGGATC TGAACGGGCA GGTGACCATC
GACGGCACGA CGCAGCCTCC GGGAAGAACC AACGGCCCGA GAATCATCAT TGACGGGCAG
AAAGCCAAGA ACTACGGCTT CGTGCTGCGC AACAATTCCA ACGTCGTCAA GGGCGTGGCC
ATGCAGAACT TCAAAACCCA GCATATCTCC ATCAGCAGCA GCTCGAACAC GGTCCAGTAC
TGCTGGTTCG GCCTGTCGGA CGACGGCCAG ACCCTCAGCT CCGGGGATGA AGTCACGTAC
GAAGGCGGGA GCGGCGTTGT CGTCGCCGCC GGCTGCAACA ACAACACCAT ACGAGGAAAT
AAGTTCGCGG GCTTCTGGGC CACGGCATGC TCTCTCAATG GGACCGGAAA CGTCTTTGCC
GCCAACAGGA TCGGAATGCG CGCCGACGGA ACGGTTCCCC TCCCCTCCTC GTTCACGAAG
CACCCCTGCC TGCGCGGAAC CGGCGAGCTG TGGGTCGGAG GGGTCGGCAT CACCGTCGCG
GGGCCGAACA ACCGCGTCGG CGGTGAGGTG GCGGATCGCA ACTTCTTCGC GGGCCTCTTT
CTGGACCTGA GCCCCACCTC GACCCAGTCG CCGGCGATAA AGGTTTACAA CGACGGCACC
GGCACGATCA TCAAGAACAA CTACATCGGG GTCACCCCCG GCAGCAAGAA CATGGGCGTC
TGCGGACGCG GTATCGACCT CGGCTCGGCC CCCGACGACG TCCAGGTGCT CAACAACACC
ATTTCGGAAA CCGACCTGAG CGCCATCCTG ATGAACGGAC CGAGTATCGA CGGGGTGACC
ATCCAGCAGA ACGTCATCAA GAGGCAGGAG CAATGGCCAG GAGCGCTGCC CGGAAACGGC
TTCGCGGAAG GCGCCATCGC CTACGGCCCC AAGGTGGATG ATCCATTGAG GAACTTCAAG
CCCGCCGCGA TCACGAGCAT TTCCGTCGGC GCGTCCGGCA CCACGGTGAA GGGCACCAGC
GGCGCCGGCG ACACTTGTGA GAACTGCACT GTCGAGGTGT TTCTCGACGA CGGGGATGCG
GTCAAGGAGT GCACGAAATT TATGAAACGC GTTACGGCGG GCAGCGACGG CAAATGGACC
GCCTTTTTCG CGACTCCTCT GCCGGCCTCC CAGGGACTGC GCACCATGAG CACGGTCCCG
GACGGGTTCG CCATCACCGG CCTGAAAAAA GGCACCACCT CGAACATTTC GGGTCTGTAC
AAGGTCCCCA AGGTCAGCGT GACCGCGTCC ACTCCGAAGG CCTACGAGGC CGGAGCCAAA
GCCGGGGTGT TCACCTTCAC GAGGGATGTG ACCTGGGGCC CGCTGACCGT GATCTACACC
ATCTCTGGGG GAGCCAAAGC GGGCATCGAC TATTACGCCC TCTCGGGCAA AGTGTCCTTC
CCCGCCGGGG TCAAATCGAA AACCGTGCAG GTCAAGCCCA AGAATGACAC CGCCGGGGAG
AACAACGAAA CGGTGAAGGT CACCATCACG GACAAACCCA CCTACAACCT CGGAAGCCCG
TCTTCCGCCA TCGTGACTAT TGTTGACAAC GATTGA
 
Protein sequence
MNRKYFLVFA MALLACFLIS SSSGVVRQAQ AAYVTEITVD STEDWYADGN SKTCISDTPC 
TLRRAINQAY QLAAGERPVL IKFGIPTSDA NYDSTLQTWK ITLTGTTSYP LRDLNGQVTI
DGTTQPPGRT NGPRIIIDGQ KAKNYGFVLR NNSNVVKGVA MQNFKTQHIS ISSSSNTVQY
CWFGLSDDGQ TLSSGDEVTY EGGSGVVVAA GCNNNTIRGN KFAGFWATAC SLNGTGNVFA
ANRIGMRADG TVPLPSSFTK HPCLRGTGEL WVGGVGITVA GPNNRVGGEV ADRNFFAGLF
LDLSPTSTQS PAIKVYNDGT GTIIKNNYIG VTPGSKNMGV CGRGIDLGSA PDDVQVLNNT
ISETDLSAIL MNGPSIDGVT IQQNVIKRQE QWPGALPGNG FAEGAIAYGP KVDDPLRNFK
PAAITSISVG ASGTTVKGTS GAGDTCENCT VEVFLDDGDA VKECTKFMKR VTAGSDGKWT
AFFATPLPAS QGLRTMSTVP DGFAITGLKK GTTSNISGLY KVPKVSVTAS TPKAYEAGAK
AGVFTFTRDV TWGPLTVIYT ISGGAKAGID YYALSGKVSF PAGVKSKTVQ VKPKNDTAGE
NNETVKVTIT DKPTYNLGSP SSAIVTIVDN D