Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0886 |
Symbol | |
ID | 4460318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 1094392 |
End bp | 1096287 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639701650 |
Product | hypothetical protein |
Protein accession | YP_845018 |
Protein GI | 116748331 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.57162 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGAA AGTACTTCCT GGTTTTTGCC ATGGCACTGT TGGCCTGTTT TCTGATTTCT TCCTCCTCCG GGGTGGTCCG GCAGGCGCAA GCCGCATACG TGACGGAAAT CACCGTGGAC AGCACCGAGG ACTGGTATGC GGACGGCAAC AGCAAGACTT GCATCAGCGA CACACCGTGT ACGCTGCGCA GGGCGATCAA CCAAGCCTAT CAGCTTGCGG CCGGAGAGCG GCCCGTCCTC ATCAAGTTTG GCATCCCCAC ATCGGACGCC AACTACGACA GTACTTTGCA GACATGGAAG ATCACCCTGA CAGGCACGAC GAGTTATCCG CTGCGGGATC TGAACGGGCA GGTGACCATC GACGGCACGA CGCAGCCTCC GGGAAGAACC AACGGCCCGA GAATCATCAT TGACGGGCAG AAAGCCAAGA ACTACGGCTT CGTGCTGCGC AACAATTCCA ACGTCGTCAA GGGCGTGGCC ATGCAGAACT TCAAAACCCA GCATATCTCC ATCAGCAGCA GCTCGAACAC GGTCCAGTAC TGCTGGTTCG GCCTGTCGGA CGACGGCCAG ACCCTCAGCT CCGGGGATGA AGTCACGTAC GAAGGCGGGA GCGGCGTTGT CGTCGCCGCC GGCTGCAACA ACAACACCAT ACGAGGAAAT AAGTTCGCGG GCTTCTGGGC CACGGCATGC TCTCTCAATG GGACCGGAAA CGTCTTTGCC GCCAACAGGA TCGGAATGCG CGCCGACGGA ACGGTTCCCC TCCCCTCCTC GTTCACGAAG CACCCCTGCC TGCGCGGAAC CGGCGAGCTG TGGGTCGGAG GGGTCGGCAT CACCGTCGCG GGGCCGAACA ACCGCGTCGG CGGTGAGGTG GCGGATCGCA ACTTCTTCGC GGGCCTCTTT CTGGACCTGA GCCCCACCTC GACCCAGTCG CCGGCGATAA AGGTTTACAA CGACGGCACC GGCACGATCA TCAAGAACAA CTACATCGGG GTCACCCCCG GCAGCAAGAA CATGGGCGTC TGCGGACGCG GTATCGACCT CGGCTCGGCC CCCGACGACG TCCAGGTGCT CAACAACACC ATTTCGGAAA CCGACCTGAG CGCCATCCTG ATGAACGGAC CGAGTATCGA CGGGGTGACC ATCCAGCAGA ACGTCATCAA GAGGCAGGAG CAATGGCCAG GAGCGCTGCC CGGAAACGGC TTCGCGGAAG GCGCCATCGC CTACGGCCCC AAGGTGGATG ATCCATTGAG GAACTTCAAG CCCGCCGCGA TCACGAGCAT TTCCGTCGGC GCGTCCGGCA CCACGGTGAA GGGCACCAGC GGCGCCGGCG ACACTTGTGA GAACTGCACT GTCGAGGTGT TTCTCGACGA CGGGGATGCG GTCAAGGAGT GCACGAAATT TATGAAACGC GTTACGGCGG GCAGCGACGG CAAATGGACC GCCTTTTTCG CGACTCCTCT GCCGGCCTCC CAGGGACTGC GCACCATGAG CACGGTCCCG GACGGGTTCG CCATCACCGG CCTGAAAAAA GGCACCACCT CGAACATTTC GGGTCTGTAC AAGGTCCCCA AGGTCAGCGT GACCGCGTCC ACTCCGAAGG CCTACGAGGC CGGAGCCAAA GCCGGGGTGT TCACCTTCAC GAGGGATGTG ACCTGGGGCC CGCTGACCGT GATCTACACC ATCTCTGGGG GAGCCAAAGC GGGCATCGAC TATTACGCCC TCTCGGGCAA AGTGTCCTTC CCCGCCGGGG TCAAATCGAA AACCGTGCAG GTCAAGCCCA AGAATGACAC CGCCGGGGAG AACAACGAAA CGGTGAAGGT CACCATCACG GACAAACCCA CCTACAACCT CGGAAGCCCG TCTTCCGCCA TCGTGACTAT TGTTGACAAC GATTGA
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Protein sequence | MNRKYFLVFA MALLACFLIS SSSGVVRQAQ AAYVTEITVD STEDWYADGN SKTCISDTPC TLRRAINQAY QLAAGERPVL IKFGIPTSDA NYDSTLQTWK ITLTGTTSYP LRDLNGQVTI DGTTQPPGRT NGPRIIIDGQ KAKNYGFVLR NNSNVVKGVA MQNFKTQHIS ISSSSNTVQY CWFGLSDDGQ TLSSGDEVTY EGGSGVVVAA GCNNNTIRGN KFAGFWATAC SLNGTGNVFA ANRIGMRADG TVPLPSSFTK HPCLRGTGEL WVGGVGITVA GPNNRVGGEV ADRNFFAGLF LDLSPTSTQS PAIKVYNDGT GTIIKNNYIG VTPGSKNMGV CGRGIDLGSA PDDVQVLNNT ISETDLSAIL MNGPSIDGVT IQQNVIKRQE QWPGALPGNG FAEGAIAYGP KVDDPLRNFK PAAITSISVG ASGTTVKGTS GAGDTCENCT VEVFLDDGDA VKECTKFMKR VTAGSDGKWT AFFATPLPAS QGLRTMSTVP DGFAITGLKK GTTSNISGLY KVPKVSVTAS TPKAYEAGAK AGVFTFTRDV TWGPLTVIYT ISGGAKAGID YYALSGKVSF PAGVKSKTVQ VKPKNDTAGE NNETVKVTIT DKPTYNLGSP SSAIVTIVDN D
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