Gene Sfum_0869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0869 
Symbol 
ID4460731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1073482 
End bp1074111 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content58% 
IMG OID639701632 
ProductXRE family transcriptional regulator 
Protein accessionYP_845001 
Protein GI116748314 
COG category[S] Function unknown 
COG ID[COG1426] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGAAA GCTATAGAGG AGGTTTGAAC GGACGCAATC AAACAACAGG AGGGCTGGAA 
TTGAACTCAG AAAAGATTGG AACAAGGGTA AGGAAATACA GGGAACAGAA ATCCCTGACC
GTATCCGAGC TCGCCTCCCG GACGGGATTG GACGAGGCGT TTCTCGAGGC CGTGGAGGAA
CACAATGTCT ACCCCTCGCT CGGCCCGCTG CTCAAAATCG CCAGAGCCCT CGGGCTGCGC
CTCGGAACGT TCCTCGACGA CCAGGAGGTC GGCGACCCGC TCATCGTTCG AGTCGGCGAA
CGCAAGGAAG AGCTCAGCAT GCTCAAGGGG AAGGACAAGC CGGTCACTCT GAGGTTCCAT
TCGCTGGGGC GCGGCAAGGG CGACCGCCAC ATGGAACCCT TCTATATTGA AATCCTGCCG
GAATCCGCCC GGGACAAGAA GCTGTCCGCA CACGAAGGCG AGGAATTCAT CGTGGTGCTG
TCCGGAGAGG TCGAGGTCAT CTACGGACAG GAGACTCATG TGCTCAAAGC CGGAGACAGT
ATCTACTACA ACTCCGTCGT GCCGCACTAC GTGAGCTCCA TCGGCAGCCG GAAGGCGGAA
ATCTACGCCG TGCTCTATTT CCCAGAATAA
 
Protein sequence
MRESYRGGLN GRNQTTGGLE LNSEKIGTRV RKYREQKSLT VSELASRTGL DEAFLEAVEE 
HNVYPSLGPL LKIARALGLR LGTFLDDQEV GDPLIVRVGE RKEELSMLKG KDKPVTLRFH
SLGRGKGDRH MEPFYIEILP ESARDKKLSA HEGEEFIVVL SGEVEVIYGQ ETHVLKAGDS
IYYNSVVPHY VSSIGSRKAE IYAVLYFPE