Gene Sfum_0868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0868 
Symbol 
ID4460730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1072393 
End bp1073286 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content62% 
IMG OID639701631 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_845000 
Protein GI116748313 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.672761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTCCG AAATCATCAA CCGCCGTTTC CTGAACATCG CGCATCGCGG CGCACGATCC 
GTTGCGCCGG AAAATACCAT GGCTGCGGCG AGAAAGGCGC TCGAGCTGGG GGGGAACATG
TGGGAGATAG ATGTGAACAG GACCGCCGAC GGCAAGCTTA TCGTCATCCA CGATAATACC
CTGGAACGCA CGTCCGACGC CAGAGAAATT TTCCCGGACC GGCGGCCCTG GTTCGTCCAC
GCCTTCACCC TGGCGGAGCT TCGCCGGCTG GACTTCGGTT CCTGGTTCTG CGCGGCGGAT
CCCTTCGGCC GGATCGCCGC CGGGGAGGTT TCAGCCGCGG AGGCGGCCGC CTACCGGGGC
GAGCCCGTTC CACTGCTTCG CGAAGCGCTC GAATTCACGC AATGCCATTC CTGGCTGGTC
AATATCGAGA TCAAGGACTT GAGAGGCACT CCCGGGGATC GTACGATCGT CGAAGAGGTT
GTTTCCCTGG TGGAAGAAAT GAACATGAAC GAACGCGTGC TGATTTCCTC CTTCAACCAC
GCCTACCTGG ACAGGGTCCG GCGTATCGCC CCCCGGACGG CCATCGGCGC GCTGACGAAT
CGTCCGGTTG CCAACCCGTT GGCGTTGCTC AGAAAATTGG GCGCCGCAAC GTTTCATCCC
CGCGCTCAAT TCCTGCGCGC AAAAGACGTC GAAAAGCTTC GGCGCGAAGG CTGCGGCGTA
CTGGTCTGGG TGATCAACGA CGCCGACACG ATGCGCAACC TGATCGCGCG ACGAAGGGTT
GCCGGAATAT TCACCGATTT TCCGCAGGTG CTTGCACAGG TGTTGCGGAA TCCCCTGGTT
TCGACGGGCG GACGATTCAG GCATTCCCCG CGGCATGAGG GCCCGAACGC ATGA
 
Protein sequence
MWSEIINRRF LNIAHRGARS VAPENTMAAA RKALELGGNM WEIDVNRTAD GKLIVIHDNT 
LERTSDAREI FPDRRPWFVH AFTLAELRRL DFGSWFCAAD PFGRIAAGEV SAAEAAAYRG
EPVPLLREAL EFTQCHSWLV NIEIKDLRGT PGDRTIVEEV VSLVEEMNMN ERVLISSFNH
AYLDRVRRIA PRTAIGALTN RPVANPLALL RKLGAATFHP RAQFLRAKDV EKLRREGCGV
LVWVINDADT MRNLIARRRV AGIFTDFPQV LAQVLRNPLV STGGRFRHSP RHEGPNA