Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0862 |
Symbol | |
ID | 4460724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 1066391 |
End bp | 1067518 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639701625 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_844994 |
Protein GI | 116748307 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGA GGGGGTTGCT CCTGTTGGCC CTGACGTTGT CGCTTCTTCC GGGAACCGGC AGCCTTGCGC TTGCCTCCGA CACCATAAAG ATCGGGCTCT ATCTGCCCAT GACCGGTGGC GTCGCGGCCT ACGGCGAGAT GGAGTGGGCG GGAATTCAGA TTGCCCGGGA CATGGAGCCT CAGGTTCTCG GAAAGAAGAT CGACCTCGTT CTGCTCGACA CCAAAAGCGA CAAGATCGAG GCGACGAACG CGATGACCCT GTTAGTGGAA AAAGAAAAAG TCGCGGGAAT CATCGGCGAA GCCATCAGCG GCAACACCAT GGCCGGTAAC CGGATCTCCG AGGCGGCGGG AATTCCGTCG GTCAGCCCGA GCGCTACGAG CGTCCTGGTC AATCAGGGCA AGAAGTTCGC TTTTCGCGCC TGCTTCATCG ATCCCCTCCA AGGGGAGGTC GCCGCGCGAT TCGCCGTCAA CAACCTCAAG GCCAAAAGCG CCGCCGTTAT CATTGACAAC GCCCAGGACT ACTGCGTCGG TCTCGCGAAG TTCTTCGAAA CGGAATTCGT CAAGCTCGGC GGCAAGGTGC TTTCAAAGAC CTACATCCAG ACCGGAGACC AGGATTTCTC CGCCCAGCTT TCATCGGTCC AGGCCGTGAA GCCCGACATC ATCTACGCCC CCAACTACTA CACGGAAGAC GCCCTGTTGG CCAAGCAGGC CCGTGACCTC GGGATCGTCT GTCCCATTCT GACCGGAGAC GGGGCCCAGG CGGACACGCT CATCCAGGTG GGCGGCAAGG CCGTGGAGGA CATGTATTTC ACCGCACATT TTCACAAGGA CGCCGCCACC ACGGACCGGG CCGCGGAATT CATGAAACGA TACAAGGAGA AACACAACAA GGAAGCCGAT GCCTTTCAAG CGCTCGGGGC GGACGCCTAC TTTCTGCTCG TGGACGCCGT CAGGCGCGCC GGGAGCACGG ATGGCGCCAG GGTCCGCGAT GCCCTTGCGT CTACAAAGGA CTTCAAGGGA GTCTCCGGGA CGATCACCAT GGGAGAGGAA GGCAATCCCA TCAAGAGTAT GGTCATCCTC AAGGTGGCAA ATGGAAAGTT CGTCTACGTG ACGACCATCA ATCCTTAG
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Protein sequence | MKKRGLLLLA LTLSLLPGTG SLALASDTIK IGLYLPMTGG VAAYGEMEWA GIQIARDMEP QVLGKKIDLV LLDTKSDKIE ATNAMTLLVE KEKVAGIIGE AISGNTMAGN RISEAAGIPS VSPSATSVLV NQGKKFAFRA CFIDPLQGEV AARFAVNNLK AKSAAVIIDN AQDYCVGLAK FFETEFVKLG GKVLSKTYIQ TGDQDFSAQL SSVQAVKPDI IYAPNYYTED ALLAKQARDL GIVCPILTGD GAQADTLIQV GGKAVEDMYF TAHFHKDAAT TDRAAEFMKR YKEKHNKEAD AFQALGADAY FLLVDAVRRA GSTDGARVRD ALASTKDFKG VSGTITMGEE GNPIKSMVIL KVANGKFVYV TTINP
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