Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0856 |
Symbol | |
ID | 4460718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 1060879 |
End bp | 1061580 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639701619 |
Product | ABC transporter related |
Protein accession | YP_844988 |
Protein GI | 116748301 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGAGA TAATGGATCT TCACGTCTTC TACGGCGGCA TCCACGCGCT CAAGGGAATA CGGCTTGCCG TCGGCGAAGG CCGTATCGTC ACGCTCATAG GCTCTAACGG CGCAGGCAAG AGCACGACCT TGCGCAGCAT TGTCGGGCTC GTGAAACCGC AGGCGGGTTC AGTCCGCTTC CGGGGCGAGG AACTGACCCG GTTGTCCACT CACCAGATCA TCCAACGCGG TATCGGCATC AGCCCCGAGG GCAGGCACGT CTTTGCGAAT CTGACGGTTT TGGAAAACCT CGAACTCGGC GCGTATAACC GTACGGCCGC GGAGTTTTCC GGACAATTGG AACGGGTCTA TTCGCTGTTC CCGCGCCTCA GGGAACGGTG CCGTCAGCTG GCGGGGACCT TGAGCGGCGG GGAACAGCAG ATGGTGGCGT TCGGTCGAGC GCTGATGGGC CGGCCGAAAC TGGTGCTGCT CGACGAGCCT TCCCTGGGGC TCGCCCCACT GGTCGTGGAA GAAGTTTTCC AGGCAATCGA GGCGGTGAGA AAGGACGGGG CCACGGTCCT GCTCGTGGAA CAAAACGCCA TGGCATCGCT GCGGATAGCC GATTATGCGT ACGTGCTGGA AACGGGCCGA GTGATCCTCG AAGGGGAGGG CAGGGTGCTG CTCGAGGATG AGAAGGTGAT CAAGGCCTAT CTGGGGGAAT GA
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Protein sequence | MLEIMDLHVF YGGIHALKGI RLAVGEGRIV TLIGSNGAGK STTLRSIVGL VKPQAGSVRF RGEELTRLST HQIIQRGIGI SPEGRHVFAN LTVLENLELG AYNRTAAEFS GQLERVYSLF PRLRERCRQL AGTLSGGEQQ MVAFGRALMG RPKLVLLDEP SLGLAPLVVE EVFQAIEAVR KDGATVLLVE QNAMASLRIA DYAYVLETGR VILEGEGRVL LEDEKVIKAY LGE
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