Gene Sfum_0852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0852 
Symbol 
ID4460714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1055100 
End bp1055594 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content61% 
IMG OID639701615 
Productribonuclease H 
Protein accessionYP_844984 
Protein GI116748297 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGGAA GGCGTCGCAT GCCTGAGACA CCCGCGATTC GAAAGCACGT GGAAATCTTC 
GCCGATGGCG CATGCCGCGG CAATCCGGGC CCGGGCGGAT GGGGTGCCGT TCTGCGCTAC
CACGGCAAGG AAAAGGAACT CTCCGGCTAT GCCGAATATA CGACGAACAA CCAGATGGAG
CTCGCCGCGG TGATCCAGGC GTTGCGTGCT CTGAAAGAAC CCTGCCGGGT GACGATCACT
ACCGATTCCC GATACCTTAG GGACGGCATC AGCCTCTGGA TTCACAAATG GAAGCAAAAC
GGATGGAAAA CGCGCGTCAA GACGGATGTC CGCAACAAGG AGCTTTGGAT TGCCCTCGAT
GAGGCCTGTC TTCCTCATGA AATCGACTGG CAATGGGTGA AGGGGCACAG CGGGCACCCG
GAGAACGAGC GCTGTGACGC ACTGGCGCGC GCGGCGATCG ACCGCCACCT CCGGGAAGCC
GCAACGGAGG AGTGA
 
Protein sequence
MRGRRRMPET PAIRKHVEIF ADGACRGNPG PGGWGAVLRY HGKEKELSGY AEYTTNNQME 
LAAVIQALRA LKEPCRVTIT TDSRYLRDGI SLWIHKWKQN GWKTRVKTDV RNKELWIALD
EACLPHEIDW QWVKGHSGHP ENERCDALAR AAIDRHLREA ATEE