Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0838 |
Symbol | |
ID | 4461043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 1040964 |
End bp | 1041683 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639701600 |
Product | ABC transporter related |
Protein accession | YP_844970 |
Protein GI | 116748283 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTTTC TGGAACTGGC AGACCTGCGC GTGAAATACG GGAACATCGA AGTGATCCAC GGAATCAATG TCCGGGTCGA GGAAGGAGAC ATCATCGCCA TCCTCGGCGC CAACGGCGCC GGGAAATCGA CCACTCTGCT CACCATCAGC GGCCTGGTGA AACCGTCCGG AGGATCGATT TCTTTCCGGG ACGCTCCCAT CCATCGGTTT CCGGCTCACA CCATCGTGAA GCTCGGAATC GCCCAGGTCC CCGAGGGGCG AAGGGTATTC GGCACGCTGA CAGTGCGCGA GAACCTCAAC CTGGGCTCCT TCGTCAGCAA GGACAAGCAG GCGATCTCAA AGACCCTGGC CTGGATCTAC GAGCTGTTTC CGATCCTTTC GGAGCGCCGC GAACAACTTG CCGGCACTCT GAGCGGCGGG GAGCAGCAGA TGCTGGCCAT CGGGCGCGCA CTCATGAGCC GCCCGAAGAT CCTTTTGCTG GATGAACCGA GCCTCGGTCT TGCGCCGTTG CTGGTCATGA CCATTTTGCA GACCCTGCGC GAAATCAACC GTTCGGGCGT CACCATCGTC CTGGTGGAAC AGAACGCACG GGCGGCCCTC AAGCTCGCCC ACCGCGGATA CGTGCTCGAG CTGGGAAACG TGGTGATAGA AGACGACTCC GCCGCGCTGA TCGCCAATGC GGAAGTCCAG GCCGCTTATC TCGGAGGCGG AATCGCCTGA
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Protein sequence | MAFLELADLR VKYGNIEVIH GINVRVEEGD IIAILGANGA GKSTTLLTIS GLVKPSGGSI SFRDAPIHRF PAHTIVKLGI AQVPEGRRVF GTLTVRENLN LGSFVSKDKQ AISKTLAWIY ELFPILSERR EQLAGTLSGG EQQMLAIGRA LMSRPKILLL DEPSLGLAPL LVMTILQTLR EINRSGVTIV LVEQNARAAL KLAHRGYVLE LGNVVIEDDS AALIANAEVQ AAYLGGGIA
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