Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0837 |
Symbol | |
ID | 4461042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 1040195 |
End bp | 1040962 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639701599 |
Product | ABC transporter related |
Protein accession | YP_844969 |
Protein GI | 116748282 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTCC TGAGTCTGCA GCGGCTCACG AAGAACTTCG GGGGCCTCAC CGCCGTCAGC AGCCTCTCTT TTGATGTCCA ACCCGGGTCA ATCGTCGGTC TGATCGGTCC CAACGGGGCG GGCAAGACGA CCGTTTTCAA CCTGATTACG GGAATTTACC TTCCCGATCA GGGCGAAATC ATGTTTCGCC AAAGCTCCAT CCTGGGAATG CGTACCCACA AAATCGTGTC CCTGGGCATT GCAAGAACGT TCCAGACCAT CCGGCTGTTT CAGAACCTGT CGGTGCTCGA AAACGTTCTT GCCGGCTGCC ACTGCCAGAT GCGTTCGGGC GTGTTGTCGT CGATGTTCCA TACGCGCAGG CAGCGCCTGG AGGAACGGGA GGCGCTCACC AGGTCGGTGA GGGCCCTGGA CTTCGTGGGG CTGCGTGCCC AGGCCGGGCA ACTTGCCCGG AACCTCTCCT ACGGAAATCA ACGCCTTCTG GAGCTCGCCC GCGCCCTGGC CACCGGCCCT CAGCTGCTGA TCCTCGATGA GCCGGCAGGG GGGATGAACG AGCAGGAGAC ACGCCGGCTC GTTGCCCTGA TTTCGAAGTT GAGAGACACG GGCATCACGG TTCTTCTCAT CGAACATGAC ATGACCCTGG TCATGAGGGT ATGCGAGAAG ATCGTGGTCC TCGAATACGG GTCGAAAATC GCGGAAGGAT CGCCCGAGGC GGTGAAAAAC GATCCCAAGG TCATTGAAGC CTACCTCGGA ACCGAAAAAG AGTGGTGA
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Protein sequence | MSLLSLQRLT KNFGGLTAVS SLSFDVQPGS IVGLIGPNGA GKTTVFNLIT GIYLPDQGEI MFRQSSILGM RTHKIVSLGI ARTFQTIRLF QNLSVLENVL AGCHCQMRSG VLSSMFHTRR QRLEEREALT RSVRALDFVG LRAQAGQLAR NLSYGNQRLL ELARALATGP QLLILDEPAG GMNEQETRRL VALISKLRDT GITVLLIEHD MTLVMRVCEK IVVLEYGSKI AEGSPEAVKN DPKVIEAYLG TEKEW
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