Gene Sfum_0837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0837 
Symbol 
ID4461042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1040195 
End bp1040962 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content59% 
IMG OID639701599 
ProductABC transporter related 
Protein accessionYP_844969 
Protein GI116748282 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCC TGAGTCTGCA GCGGCTCACG AAGAACTTCG GGGGCCTCAC CGCCGTCAGC 
AGCCTCTCTT TTGATGTCCA ACCCGGGTCA ATCGTCGGTC TGATCGGTCC CAACGGGGCG
GGCAAGACGA CCGTTTTCAA CCTGATTACG GGAATTTACC TTCCCGATCA GGGCGAAATC
ATGTTTCGCC AAAGCTCCAT CCTGGGAATG CGTACCCACA AAATCGTGTC CCTGGGCATT
GCAAGAACGT TCCAGACCAT CCGGCTGTTT CAGAACCTGT CGGTGCTCGA AAACGTTCTT
GCCGGCTGCC ACTGCCAGAT GCGTTCGGGC GTGTTGTCGT CGATGTTCCA TACGCGCAGG
CAGCGCCTGG AGGAACGGGA GGCGCTCACC AGGTCGGTGA GGGCCCTGGA CTTCGTGGGG
CTGCGTGCCC AGGCCGGGCA ACTTGCCCGG AACCTCTCCT ACGGAAATCA ACGCCTTCTG
GAGCTCGCCC GCGCCCTGGC CACCGGCCCT CAGCTGCTGA TCCTCGATGA GCCGGCAGGG
GGGATGAACG AGCAGGAGAC ACGCCGGCTC GTTGCCCTGA TTTCGAAGTT GAGAGACACG
GGCATCACGG TTCTTCTCAT CGAACATGAC ATGACCCTGG TCATGAGGGT ATGCGAGAAG
ATCGTGGTCC TCGAATACGG GTCGAAAATC GCGGAAGGAT CGCCCGAGGC GGTGAAAAAC
GATCCCAAGG TCATTGAAGC CTACCTCGGA ACCGAAAAAG AGTGGTGA
 
Protein sequence
MSLLSLQRLT KNFGGLTAVS SLSFDVQPGS IVGLIGPNGA GKTTVFNLIT GIYLPDQGEI 
MFRQSSILGM RTHKIVSLGI ARTFQTIRLF QNLSVLENVL AGCHCQMRSG VLSSMFHTRR
QRLEEREALT RSVRALDFVG LRAQAGQLAR NLSYGNQRLL ELARALATGP QLLILDEPAG
GMNEQETRRL VALISKLRDT GITVLLIEHD MTLVMRVCEK IVVLEYGSKI AEGSPEAVKN
DPKVIEAYLG TEKEW