Gene Sfum_0811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0811 
Symbol 
ID4460172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1003924 
End bp1004922 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content59% 
IMG OID639701574 
Productcoenzyme A transferase 
Protein accessionYP_844944 
Protein GI116748257 
COG category[I] Lipid transport and metabolism 
COG ID[COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.255875 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCAG TTCGCGACAA GAGGATGACG CTCAAGGAGG CAGTATCAAA GTACGTAAAC 
GATGGCGATA CTGTTTACTA CGGTGGCTTC CAGATCCACG TCCCCATGGC TCTGACCCAC
GAAATCATCA GACAGAAAAA GAAGAACCTT CATATCATCA ATGCATCCAC GGACGTGGGC
GGCCTGGACC TGTTGGTAGC CGGCGGGTGC GTCAGTGAAA TGCACATCGC GTGGGCCATG
AACTGGTATG TGAAGGCTCC CTACGCGATT CGCCGTGCTT TCCAGTCCGG GCAGCTCAAG
CGCTTCGACC TGTCCAATTT CGGTGCCACG AGCGCATTGA TCGCCGGCTT TTTAGGCATT
CCTTTCATCC CTGTCCGCGG CAACATCGGC ACCGATATCA TCAAGTACAA CCAAACCGAC
GCCAAGGTCA TCGAGGATCC CTTCACCGGC TCGAAAATCA CGGTGGTTCG TGGTTGGAGG
GCGGACGTGG CGATCATCCA CGCGCAGAAG GTCGACCGCC TGGGCAACGT GGTGACCTGG
GGCACCCGCG GTGTCACCGA CGAGTTCGGC ACGATGGGAA CCAAGCGGGG CGTTATCGTC
ACCGCCGAGG AGATCGTCGA GCCCGAAGAG GTGAGGAGCG ATCCGGACCG GACTCTGGTT
CCGTACTTCA AGACCCTGGC CGTCGTACAC TGCCCGTGGG GCGCTCATCC GTCGGCCTGC
CGCGGCTACT ACGGCCTGGA CATCCGCTTC TCCCAATACC AGGGCAAGTA CGAACGGAGC
GCGGAGCTTC TTCCCCACTT CATGAAAGAG TGGATTTTCG GCTGCGAGGA CCATGCGGCG
TACATCAAGA AGTACGTTTC GAAGTTTGGC CAGCAAGGGC TCGACCGCCT CAAACCGGTG
CTCGGTTTCG AGCCGAAGAT GAAGGTCGAC TACGGCTATC ACGATCCCGC CGTCTGGAAG
GGCGTGCCGC AGTACACCGA CGAACACATC AAGGCCTAG
 
Protein sequence
MAAVRDKRMT LKEAVSKYVN DGDTVYYGGF QIHVPMALTH EIIRQKKKNL HIINASTDVG 
GLDLLVAGGC VSEMHIAWAM NWYVKAPYAI RRAFQSGQLK RFDLSNFGAT SALIAGFLGI
PFIPVRGNIG TDIIKYNQTD AKVIEDPFTG SKITVVRGWR ADVAIIHAQK VDRLGNVVTW
GTRGVTDEFG TMGTKRGVIV TAEEIVEPEE VRSDPDRTLV PYFKTLAVVH CPWGAHPSAC
RGYYGLDIRF SQYQGKYERS AELLPHFMKE WIFGCEDHAA YIKKYVSKFG QQGLDRLKPV
LGFEPKMKVD YGYHDPAVWK GVPQYTDEHI KA