| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0801 |
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| Symbol | |
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| ID | 4460454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 988479 |
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| End bp | 990554 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639701563 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_844934 |
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| Protein GI | 116748247 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.177675 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGAGGCGC CCCCCCGTCG GACGGGACCG GTTATCGCTT CCTTTTTCCA GGAAAGGTGG
TTTTCGTCGA ATATGGTATC CTTTTCTCTG CAAAGCAACT GGCCTCCCAC CGGTGACCAA
CCCGAAGCGA TCGACAGGCT CGTGACGGCC ATCGAAAAGG GCGTGAGGGA ACAGACCCTG
CTCGGTGTCA CCGGTTCGGG AAAGACCTTT ACGATGGCGC ACGTCATTCA GAGAGTGCGC
AAACCCTCCC TGGTGGTCGC TCCGAACAAG ACGCTGGCCG CTCAACTCTA CGGGGAATTC
AAGGCGTTTT TCCCGGACAA CGCCGTCGAG TATTTCGTCT CCTATTATGA CTACTACCAG
CCGGAAGCCT ACGTGCCGCA GACCGACACC TATATTGCCA AGGATTCCTC CATCAACGAG
ACGATCGACA AAATGCGTCA TTCGGCCACG CGGTCTCTGC TGGAACGCAG GGACGTCATC
ATCGTGGCCA GCGTTTCCTG CATCTACGGC CTGGGATCGC CGGAGACCTA CCAGGACATG
CAGCTGCAGC TGAAAACCAA CCTGCGGATT TCGCGTGAAC AGGTGCTGCG CAAGCTCGTT
GAGATCCAGT ACGAACGCAG CGACGACGAC TTTCATCGGG GAACGTTTCG GGCCAGAGGC
GACGTGGTCG AAGTTTTCCC CGCCTATGAA GAAGACCGCG CGCTGCGGAT CGAGTTTTTC
GGCGACGAGG TTGACAGCAT CAAGGAAATC GATCCCCTGA CCGGCAAAAC CGTTCGTTTT
CTGCAGCGTG CGGACATCTA CCCCGGGACT CACTATGTCA CGAGCCGCGA CAACCTGGAG
AGAGCCGTAA AGGCCATACA GTTCGAACTG TCCGAACGAC TCGAGGAGTT TCACAGGGAA
GGCAAACTGG TGGAGGCCCA GCGGCTGGAG GAGCGCACGC GGCTCGATCT GGAGATGCTG
CTCGAGCTCG GTTACTGCAA CGGCATCGAG AACTACTCGA GGCACCTCGA CGGACGAAAG
GCGGGATCGG CCCCCGCGAC GCTTGTCGAC TACTTCCCGG ACGATTGGCT CCTGTTCATC
GATGAAAGCC ACATTTCCGT TCCCCAGATT CGAGGCATGT ACCGGGGAGA TCGCGCCCGA
AAGGAGACCC TGGTCCGTTA CGGGTTCCGC CTGCCTTCGG CCCTGGACAA CCGCCCCCTC
TCCTTCCATG AATTCGAAAA GAAGCTGCGA CAGGCAGTCT ACGTGTCGGC CACTCCGGGT
CCCTACGAAC TGATGAAGGC CGGTTCTCAC GTGGTCGAAC AGATCATCCG GCCGACCGGC
CTGGTCGACC CCCGCATCGA GGTGCGACCG GCGGATCACC AGGTGGATGA CCTGGTCGGG
CAGATCCGCA GGCAGGTGGC CGCCGGCCGC CGGGTTCTGG TGACCACCCT GACCAAGCGC
ATGGCCGAGG ATCTCACGGA ATACCTCGTG GAGCTCAATA TCAGGGTCCG GTACATGCAT
TCCGACATCA ATACCGTGGA ACGCATCGAA TTGGTGCGGG ACCTCAGGCT TGGGGAATAC
GACGTACTGG TCGGCATCAA TCTTCTTCGG GAAGGGCTGG ACATTCCCGA GGTTTCCCTG
GTGGCGATCC TCGATGCGGA CAACGAAGGG TTTCTCCGGT CGGAACGTTC GCTCATTCAG
ACCTGCGGGA GAGCGGCGCG CAACGTGAAC GGCAGCGTGA TTCTTTACGC GAACCACGTC
ACCGACTCCA TGCGCAGGGC GATCGAGGAG ACCGAAAGGC GACGCAGGAT CCAGCTCGAA
TACAACCTGG CCCACGGAAT CACGCCCCGC ACGGTCGAAA AGGACATCAC CGACATCCTT
GCCGACTACA GGGATCGGGA CGCCCCCGCC CCGCCGGATT TTGCATCGGA AGCCCGGGCC
GAATTCGAAA GTGCTCCCGC GGGCTCCCCC GACGAACGCA TCCGCCAACT CGAAAAGGCG
ATGAAAGAAG CCGCCGCGGA ACTGGAATTC GAACGGGCGG CGCACCTGCG CGATCGCATC
AAGTTCCTGC GCCGACAGCA ATTGCTGGTG CAGTGA
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| Protein sequence | MEAPPRRTGP VIASFFQERW FSSNMVSFSL QSNWPPTGDQ PEAIDRLVTA IEKGVREQTL
LGVTGSGKTF TMAHVIQRVR KPSLVVAPNK TLAAQLYGEF KAFFPDNAVE YFVSYYDYYQ
PEAYVPQTDT YIAKDSSINE TIDKMRHSAT RSLLERRDVI IVASVSCIYG LGSPETYQDM
QLQLKTNLRI SREQVLRKLV EIQYERSDDD FHRGTFRARG DVVEVFPAYE EDRALRIEFF
GDEVDSIKEI DPLTGKTVRF LQRADIYPGT HYVTSRDNLE RAVKAIQFEL SERLEEFHRE
GKLVEAQRLE ERTRLDLEML LELGYCNGIE NYSRHLDGRK AGSAPATLVD YFPDDWLLFI
DESHISVPQI RGMYRGDRAR KETLVRYGFR LPSALDNRPL SFHEFEKKLR QAVYVSATPG
PYELMKAGSH VVEQIIRPTG LVDPRIEVRP ADHQVDDLVG QIRRQVAAGR RVLVTTLTKR
MAEDLTEYLV ELNIRVRYMH SDINTVERIE LVRDLRLGEY DVLVGINLLR EGLDIPEVSL
VAILDADNEG FLRSERSLIQ TCGRAARNVN GSVILYANHV TDSMRRAIEE TERRRRIQLE
YNLAHGITPR TVEKDITDIL ADYRDRDAPA PPDFASEARA EFESAPAGSP DERIRQLEKA
MKEAAAELEF ERAAHLRDRI KFLRRQQLLV Q
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