Gene Sfum_0792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0792 
Symbol 
ID4460445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp978057 
End bp978923 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content57% 
IMG OID639701554 
Producthypothetical protein 
Protein accessionYP_844925 
Protein GI116748238 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.565262 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.407437 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGG AACCTTTCGT TCCAGTTGTT ATTATCGGTG CCGGAAGGTC GGGCACCAAC 
ATTTTGCGCG ACACGCTCGC GCGGGTGCCC GGGCTCGGAA CCTGGCCGTG TGACGAAATC
AATTACATCT GGCGACATGG AAACGTCCGA TGGCCAAATG ACGAATTCTC CATCGAACAT
GCCAGGCCCG AGGTGAAGGC CTTTATCAGG AGAGCATTCC AAAAATTGGC CGTTTCCCGG
GGCTTCACGC ATGTGGTGGA AAAGACCTGC GCCAATTCCC TCCGCGTTGC GTTCGTCAAC
GCCGTCCTGC CTGACGCGAA ATTCATCCAC ATCCTCAGGG ACGGCAGGGA TGTGGTCAGT
TCCGCCCAGA AACGCTGGAC GGCGCGCCTG GACCTGCCGT ATGTGATGGC GAAAGCGCGT
TTTGTGCCGG TTTCAGACGT TCCCTACTAC GCGTCCCGCT ACTTGTGGAA TCGGATCTAC
ATGCTTTCCT CGGGAGAAAA GCGGCTTGCA TTCTGGGGGC CCCGTTTTCG GAACTTGGAT
GATGCCTTGA AGAACCATTC CCTGGAAGAG GTGTGCGCCC TGCAGTGGAT GAGGTGTGTC
GAGAAGGCCG AAGACGAGCT CGGCTCCATC GAACCGTCAA GGATTCACAG GGTCCGCTAT
GAGCGCTTTG TATCCGACCC GGCTGCGGAG TTGACGAAGA TCATCGCGTT TCTCGGCCTT
GAAAAAGTCA GCGGTCCCAT TGAACGATGG GTTGCTCCCG TGAAGACCGA CAGCGTCGGC
AAAGGAAGGC GAGAGATGAA GAGTGACCGG ATGCTCTCGG TGGAAAATTT GATGCAGGGC
ACCCTGGAGC GATTCGGCTA CCTCTGA
 
Protein sequence
MKKEPFVPVV IIGAGRSGTN ILRDTLARVP GLGTWPCDEI NYIWRHGNVR WPNDEFSIEH 
ARPEVKAFIR RAFQKLAVSR GFTHVVEKTC ANSLRVAFVN AVLPDAKFIH ILRDGRDVVS
SAQKRWTARL DLPYVMAKAR FVPVSDVPYY ASRYLWNRIY MLSSGEKRLA FWGPRFRNLD
DALKNHSLEE VCALQWMRCV EKAEDELGSI EPSRIHRVRY ERFVSDPAAE LTKIIAFLGL
EKVSGPIERW VAPVKTDSVG KGRREMKSDR MLSVENLMQG TLERFGYL