| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0790 |
|---|
| Symbol | |
|---|
| ID | 4460443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 975298 |
|---|
| End bp | 976464 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639701552 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_844923 |
|---|
| Protein GI | 116748236 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAATG CGTCTGATGG AGGAGTTCTG CTGGTTGGCC CGAGGCTGGA TCCCGCTCAT
ACGGTGACCG GGTCTCGAGT GGGATTCGAA CACGCCATAT CGGCCTTCCG GAAGAAAGGC
CTCAAGCACG AGATCGTCAA CACCGTCAAG GGCGGTGTCG CGCGAGCGGG ATCGTTCAGC
GTGACGCGAG CAATCCATAC CTTAGGCCTC ATCGCCTCGT TTCTTCGTAA GCTGAGGGGC
TGTCGCACGG TCTATCTCAC CATCGGCTCA TCTCTGATGG GATTCATCCG GGATGCGTCG
CTCATCTGGC CGAGCCGCCT CATGGGAAGA AGGATCGTTC TGCGGCTCTA CGGCGGCGGA
TACGGGATGT TCTATTCCGA GCAACCGGCG ATTCTGAGGA AACTGATTCG CCGCACGCTG
GCGCAGGCTA CGGTCATCAT GGTCGAGGGG AAACTGTTGC GTGAGCAGTT GGATTTCGTT
CCGGAAATCG ACAGAAAGAT CCGTGTGGTT CCCAATGGAT TGCCGGACGA CCTGCTTCCC
GGAACATCCG GTCCCAAGTT GTTGCCGGAC GGTGCCCCGT TTCGGCTGCT CTATCTGGCC
AACATGATCG AATCAAAAGG CTACCTGGAC CTGCTGGCGG CATGTCGCAT CCTCAGGGAG
AAGTACTCCC TGCCCATCCG GTGTGATTTT TGCGGGGCGT TCATCAAGAC CGCGGTGGAC
GGCGCGGACT TGAGCGGCGA AGAGGCCGGC AGGCGGTTCC ATGATCTCGT CGACCGTTGG
GGCCTGAGCG ATGTCGTGGA ATTCCATGGT GTCGTCGGAG GAGAATTGAA GACGAGACTC
CATGTGGAAT CTCATGCTTT TGTCCTGCCC ACGAGGTATC CGTGGGAGGG ACAGCCGATC
GTCATCATCG AGGCCCTCGC TTTCGGGACT CCGGTGATTG CCACGCCATA CAGGGGAATC
CCCGAAGAGG TAATAGACGG CTACAACGGC GCCTTCGTCG ATCCCGGCGC TCCCGAGCAG
ATCGCGGACA GGGTCGCGGG CCTTGCGCGT GACCCGGACG GTTACCGGCA GCTCAGCGCC
AATGCGCTGG CGCATTTCGC GCGGAACTTC ACTCAGGAAG TGCATTTCGA CCAGGTCGTC
GCGGCCGTGT GCGGCGAGGA CGGATGA
|
|---|
| Protein sequence | MPNASDGGVL LVGPRLDPAH TVTGSRVGFE HAISAFRKKG LKHEIVNTVK GGVARAGSFS
VTRAIHTLGL IASFLRKLRG CRTVYLTIGS SLMGFIRDAS LIWPSRLMGR RIVLRLYGGG
YGMFYSEQPA ILRKLIRRTL AQATVIMVEG KLLREQLDFV PEIDRKIRVV PNGLPDDLLP
GTSGPKLLPD GAPFRLLYLA NMIESKGYLD LLAACRILRE KYSLPIRCDF CGAFIKTAVD
GADLSGEEAG RRFHDLVDRW GLSDVVEFHG VVGGELKTRL HVESHAFVLP TRYPWEGQPI
VIIEALAFGT PVIATPYRGI PEEVIDGYNG AFVDPGAPEQ IADRVAGLAR DPDGYRQLSA
NALAHFARNF TQEVHFDQVV AAVCGEDG
|
|---|
| |