Gene Sfum_0780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0780 
Symbol 
ID4460811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp957093 
End bp959009 
Gene Length1917 bp 
Protein Length638 aa 
Translation table11 
GC content60% 
IMG OID639701542 
Producthypothetical protein 
Protein accessionYP_844913 
Protein GI116748226 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.27648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTC GATTTTTCCT CAAGATTCTT GGACTGCTGG GGCTCCAGAG CGCCCCGTGG 
CTGGACTCGA TCCTGCCGGG AGCTCGTTTC CTTGCCGAGG CGGCCTCGCC AACACGTCCC
GCCGACCGCG CGCAGCCGGG TCCGCGCAGT GCGCCCGCCT GGTTTGAGAA ATACCGGGTG
CACGCTCATA CCCGCCTGAC GTTGCGCATG CTGGGTGAGG ATGTATTCTC CAGGGCGGCC
CAACACTTCA GGGCAATGGG GGTTCATGTT GTCGTCAGGC ATATCAAGTC GGGCAGCGAA
GGAGCGTGGT GGCCCAGTGC GGTCGGTGCA ACGGCTCCGG AGGCGAAGAA CCGGAACATC
GCCAGGGAAA TCATCGAGAG CGCGCACCGT GAAGGGCTCA ACATAATCGT CTACCATCGG
CATATGGAAG ACGACCACAT GGCCGAGTCG CATCCGGACT GGGTGTGCAA GGACTGGCTC
GGCAGGCCGA TGCGTACCCG CAGGGGCAAA TACATGTGCC TGAACTCACC CTATACGGAC
TACTACCTCC AGCGGGTCAC GGAGCTGGTG AGAATGGGCG CCGACGGTTT CTATTTCGAT
GACTCTCACA TGCCGAAAAC AGGATGCTGG TGCCAGTATT GTAGAAAACT GTTCAGAGAG
CAAACCGGCC AGGCCCACCC GCGCAGGCCC GATGCCCGCG ATCCCGTCTG GAACAAATTG
ATCGATTTCA ACAACTGGAC CATCGAGAGG GCATTCCGGA AGTGGTCCCA TGGGTTGCAC
AACGAGAATC CCAACGTGGT GTTGCTGGTG TCCGGGAACA CTTGGCCGGC AATCGTCGAC
AGGCATTTGA CGGATCGCGT CTTCCGAATC GCGGATTCCG GCAAGAGCGA ATTCAGTCTG
CCCGCCAGGG AGTTCCCGAA GTGGAGGCTC TACCACCTGA GCAGTGACAT GAAACCATTC
GAGACGGACG CAAAAATCGC ACTCGGATAC ACCATGATCA GGGATGTTGC CGATGGAAGG
CCCGGACACA TCTGGATATA CGGTCTCAAA GACGACTTGT CGTCGCTCTA TGCGGTGGCG
GGCGTTGTCA GCCACGGCTG CATCGCAAAC CTCGATATTC CGGAGAACAG CATCTCCGCC
CACCCGTTCA AGAAGGCCGT GGCGCTCGGC AATACGGTTT CGCCCTATTT TTCCGGGAGC
CGGCCGATGC GCTGGGCGGC CGTCCATTTT ACGGAGCATG GACGGGATCA GTACCTCGCT
TCGCCGGAGG CGGCCCTGAC ACGGGTCCTC TATCCGTATT ACGGCGCCTA CCGGGCATTG
CTGAGGTCCC GCGTGCCCGT TGGAGTCATC AGTGACAGCC AACTGGAAGA AGGAAACCTG
GAAGACTACA AGGTTTTGTT TCTCCCCGCT CCGAAGACGC TGACCGGGAC GATGGCCCAG
TCCGTTCAAA AGTTCAGGGA CCAGGGCAAC CTGGTCGTTG AAAACAGGGA CGAATGGGCC
TGGCATGCGA ACGTCGGATC CGACAGGGCG GTAAACGATT TCCTCGCGGC GCTCGGGCCG
CAAATGTCCA AGGTGCCGGT CAGGGTATCG GGCGGCCCCG AGAAGATGCA CGCGGTCTTT
TTCACCAACC CCGCGGGAAC GCGGCTTACG GTTTCGCTGT GCAACGATTT CTCCTGGGTC
CCGACGGGCG GTCCCGCGAA CTGGCGGGAG CGTGCGCGAG GTCTTTCGGA GAGGGACGGT
ATTCCGTCGC CGTGCGATGG CGTGAAGATA CTGCTGCGAG GGAAAAGGCC GCCTCGGAAG
ATTTTCGAGG CAGTGTCCGG AAAGAGCCTG TCCACCGGGG CATCGGGTGA AGATACCGTT
ATCGACGTGC CCCGTTTTGA ATACATGGCC GTCGTGGTTG TTGAATGGGA AGGCTGA
 
Protein sequence
MKRRFFLKIL GLLGLQSAPW LDSILPGARF LAEAASPTRP ADRAQPGPRS APAWFEKYRV 
HAHTRLTLRM LGEDVFSRAA QHFRAMGVHV VVRHIKSGSE GAWWPSAVGA TAPEAKNRNI
AREIIESAHR EGLNIIVYHR HMEDDHMAES HPDWVCKDWL GRPMRTRRGK YMCLNSPYTD
YYLQRVTELV RMGADGFYFD DSHMPKTGCW CQYCRKLFRE QTGQAHPRRP DARDPVWNKL
IDFNNWTIER AFRKWSHGLH NENPNVVLLV SGNTWPAIVD RHLTDRVFRI ADSGKSEFSL
PAREFPKWRL YHLSSDMKPF ETDAKIALGY TMIRDVADGR PGHIWIYGLK DDLSSLYAVA
GVVSHGCIAN LDIPENSISA HPFKKAVALG NTVSPYFSGS RPMRWAAVHF TEHGRDQYLA
SPEAALTRVL YPYYGAYRAL LRSRVPVGVI SDSQLEEGNL EDYKVLFLPA PKTLTGTMAQ
SVQKFRDQGN LVVENRDEWA WHANVGSDRA VNDFLAALGP QMSKVPVRVS GGPEKMHAVF
FTNPAGTRLT VSLCNDFSWV PTGGPANWRE RARGLSERDG IPSPCDGVKI LLRGKRPPRK
IFEAVSGKSL STGASGEDTV IDVPRFEYMA VVVVEWEG