Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0771 |
Symbol | smpB |
ID | 4460802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 946554 |
End bp | 947039 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639701533 |
Product | SsrA-binding protein |
Protein accession | YP_844904 |
Protein GI | 116748217 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0691] tmRNA-binding protein |
TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0749395 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAGA ACAAGCCCTC GACCGCTGAA AAGACCCGAC TGATCTGCCA GAACAAGAAG GCATATCACG ACTACGATAT CCTGGAGAAA TTCGAGGCGG GAATCGTCTT GCTGGGCACC GAGGTGAAGT CGCTGCGGGA AGGCAGGGCG AACCTCAAGG ACAGTTACGC CCGGGTGAGG AAGGGGGAGG TTTTCCTCCA GGGGCTTCAC ATCAGTCCCT ACACTCACGC CTCCTACAAC AACCATGAAC CCGAACGGGT TCGCAAGCTC CTGCTCCATG CCCACGAGAT CAAGAGACTG ACCGGCAAGA CCCAGGAGCG GGGCCTCGCG CTGATTCCTT TGAAACTCTA CTTCAGCAAG GGAAAAGTGA AGGTGGAGCT TGCCCTGGCA CAGGGCAAGA AGCTCTACGA CAAGAGGGAG AGCATCAAAC GGAAAGAAGA GAACCGGGAG CTCGACCGCC TGAGAAAACG CCGCAGGCAG GAATGA
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Protein sequence | MTKNKPSTAE KTRLICQNKK AYHDYDILEK FEAGIVLLGT EVKSLREGRA NLKDSYARVR KGEVFLQGLH ISPYTHASYN NHEPERVRKL LLHAHEIKRL TGKTQERGLA LIPLKLYFSK GKVKVELALA QGKKLYDKRE SIKRKEENRE LDRLRKRRRQ E
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