Gene Sfum_0771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0771 
SymbolsmpB 
ID4460802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp946554 
End bp947039 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content57% 
IMG OID639701533 
ProductSsrA-binding protein 
Protein accessionYP_844904 
Protein GI116748217 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0691] tmRNA-binding protein 
TIGRFAM ID[TIGR00086] SsrA-binding protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0749395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGA ACAAGCCCTC GACCGCTGAA AAGACCCGAC TGATCTGCCA GAACAAGAAG 
GCATATCACG ACTACGATAT CCTGGAGAAA TTCGAGGCGG GAATCGTCTT GCTGGGCACC
GAGGTGAAGT CGCTGCGGGA AGGCAGGGCG AACCTCAAGG ACAGTTACGC CCGGGTGAGG
AAGGGGGAGG TTTTCCTCCA GGGGCTTCAC ATCAGTCCCT ACACTCACGC CTCCTACAAC
AACCATGAAC CCGAACGGGT TCGCAAGCTC CTGCTCCATG CCCACGAGAT CAAGAGACTG
ACCGGCAAGA CCCAGGAGCG GGGCCTCGCG CTGATTCCTT TGAAACTCTA CTTCAGCAAG
GGAAAAGTGA AGGTGGAGCT TGCCCTGGCA CAGGGCAAGA AGCTCTACGA CAAGAGGGAG
AGCATCAAAC GGAAAGAAGA GAACCGGGAG CTCGACCGCC TGAGAAAACG CCGCAGGCAG
GAATGA
 
Protein sequence
MTKNKPSTAE KTRLICQNKK AYHDYDILEK FEAGIVLLGT EVKSLREGRA NLKDSYARVR 
KGEVFLQGLH ISPYTHASYN NHEPERVRKL LLHAHEIKRL TGKTQERGLA LIPLKLYFSK
GKVKVELALA QGKKLYDKRE SIKRKEENRE LDRLRKRRRQ E