| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0737 |
|---|
| Symbol | |
|---|
| ID | 4460820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 903020 |
|---|
| End bp | 903436 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639701499 |
|---|
| Product | UspA domain-containing protein |
|---|
| Protein accession | YP_844870 |
|---|
| Protein GI | 116748183 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.543715 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAGC GTATCCTCGT TCCGACGGAC TTAACGGAAA GAACCCTCAA GGCGCTGAAT
ATCGCGCTCA AGATCGCCGT GCACGACGGA GCTTCGATCA CCCTCCTGCA CGTCATAGAG
ACGATCGAAG ACACCGAGGA GGATTTCAGC GGTTTTTACA GCAAGCTGGG AAAAGCGGCG
GAAAAGAAGA TGAACGAGAT CATCGAGGAT TTCCGTGTGA ATGGGCCGGC GATCGCCAAG
GAAATCATAT ACGGGAAACG AGTCAGGGAA ATCATTCGAT TTGCCGCCGA AAAGGAGATC
GACCTGATCG TTTTGAGCTC GCACCGGGTG GACGTGGACA ACGCCGTGCA GGGATGGGGC
ACCATCAGCT ACAAGGTCGG CATCCTGTCC CAGTGCCCGG TGTTGCTGGT GAAATGA
|
|---|
| Protein sequence | MFKRILVPTD LTERTLKALN IALKIAVHDG ASITLLHVIE TIEDTEEDFS GFYSKLGKAA
EKKMNEIIED FRVNGPAIAK EIIYGKRVRE IIRFAAEKEI DLIVLSSHRV DVDNAVQGWG
TISYKVGILS QCPVLLVK
|
|---|
| |