| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0731 |
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| Symbol | |
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| ID | 4460797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 891642 |
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| End bp | 897329 |
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| Gene Length | 5688 bp |
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| Protein Length | 1895 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639701493 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_844864 |
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| Protein GI | 116748177 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.231834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAAGA AAAGCTCGCC AAACGGAAAC GAGCCGTTGA TACGCCTGAG AGGCGTGCGG
CAGCACAACC TGAAGAATAT CGACCTCGAT CTGCCTCTGA ACAAGCTCAT CGCGGTGAGC
GGTCTGAGCG GCTCGGGGAA ATCGAGCCTC GCCCTGCACA CGCTATACGC CGAAGGGCAG
AGGCGCTACG TGGAGACCTT TTCGCCTTAC GCGCGGCAGT TCCTCGAGCG AATGGATCCA
CCCGAGGCCG ATCTGATCGA GGGGATTCCC CCCGGCATCG CCATCGAATC GGGAACGGCC
GTGCGCAGTT CACGCTCCAC CGTGGGCACC ATCACCGAAA TCAACGACCA TTTGAAGCTC
CTCTATGCCC GGCTGGCGGT TCTGCATTGC CCGGAGTGCG ACCGCCCGGT CGCGAGGGAT
ACGCCTGAGA GCGTCTACCG GAGCTTGCAG GAACTGCCGG ACCGGAGCCG CGTTCTGATC
GCATTCCCGT TCCTGCCGGA CAATTCGGGG GACTGGGTCC GTAGCCTGGT GGCTTCCGGT
TTTCTGCGGC TCTACGTCGG AGGCCGCACA GTGGAGCTCG AGGAGATCGG CGACGCGGCG
TCGGAATACG GCAGGGGGGA GGTCCTCGTG GTCGTGGACC GGCTTTCCTG GGGGAGCGCG
GCCCGGGAAC GCGTCGCGGA TTCCCTCGCC ACCGCCTTCC ATGCCGGGAA CGGCCACGCC
GCGGTCGTCG TTCTGCCCGA CACGGTGAAA CGTTTCAGCT CGGACCTCAG CTGCGCCGAC
TGCAATCCGG GCCTTTCTTT TTCCCCGCCC ACACCCAACC TTTTTTCCTT CAACAGCCCG
CTCGGCGCGT GCCCGGAGTG CCGGGGTTTC GGCCGGACCA TCGGCGTGGA TCTGGACCTG
GTCATTCCGG ACCGGAGGCT GACGTTGCGC CGGGGGGCGA TCAAACCCTT CGGCACGGAT
CGGATGGAAA CCGAAGATTT GATGCGATTC TGCGCCGGGG AGGGAATCCC CGTGGACGTC
CCGTTCGAGG ATCTCGACGA GAAGGACCGG GAAAAAATCA TCAACGGCAC GAAGGATTAT
TACGGCATCA AGGGCTACTT CGAATGGCTC GAGGGCAAGA CCTACAAGAT GCATGTGCGC
GTTTTCCTGT CGCGGTACCG GGCATACACC CGATGCAGGA GCTGCGCGGG CACGCGGTAC
AGGCCGGAGA CCCTGCTGTA TCGGCTGCAT GGCGAGACCA TCGGCGCGTT GAGCGCCTGG
AGCATCGAGA AGTGTGCCGA GTTCTTCAGC GGCGGCTGGC CGGAGCTCGC CCGGGATCCC
GCGGCCGAGC TGCTGGTCAA GGAAGTCAGG AGCCGGCTCG AATTCCTGCG CGCCGTCGGA
CTCGAATACT TGTCCCTGGA CCGGCAGTCG CGCACGCTTT CCGGTGGCGA GGTGCAGCGG
GTGCACCTCA CGCGGGCGCT CGGGTCGGCC ATGGTCAACG TGCTCTACGT GCTCGACGAG
CCGAGCGTGG GGCTGCACGC CAGGGACCAG AAACGGCTCA TGGGGCAGCT TCGCCGCCTC
GTCGACATCG GCAACACCGT GGTCGTCGTC GAGCACGATC CGGACATGAT CCGGTTTTGC
GACCTCGTGG TCGACATGGG CCCGGAAGGA GGGGAGAAGG GCGGCGAGAT CGTCTACCGG
GGCACTCCCG AGGGGATGAA GCGTGAAAAG CGGAGCCTCA CGGGGGGGTA CCTGTCCGGG
AGGCTCGAGG TCGGCTGCGA GCTTCGCAGG CGCAGGCGAC CCGAAAACGG CCGCAGCCTG
GTACTGCGGG GCGCGCGGGA AAACAATCTC AAAAACGTCA CGGTGGAATT TCCCCTGGGA
ATACTCGTCG GAGTGAGCGG GGTTTCCGGC TCGGGCAAGA GTACCTTGGT CGAGAAATCT
CTCTACTACA ACTGGCTGCG CAAGATGGGC CGCGCGACGG AAGCCCCGGG AGCGTTGGAC
GCCATGGAGG GGGCGGAATG GATCGAGGAG GTCGTCCTGG TTGACCAGCA GGCCATCGGG
CGGACGCCCA GGGCGAACCT GCTCACCTAC AGCCGGGCCA TCGATCCCAT TCGAAAACTC
CTGGCCCAGA CCCCCGAAGC CGTCGCGCGC GGTTACCCGG CGAGTCATTT CTCGTTCAAC
GTGCCGGGGG GGCGATGCGA GCTCTGCAAG GGCGAAGGAT TCGAACGCGT GGAGATGCAG
TTCCTTGCGG ATGTGCTGAT CCGGTGCCCC CAGTGTAACG GTCTGCGCTT CAAGGACGAA
ATCCTGGAAG TCAGGGCGCG CGGCCTGTCC ATCGGGGATA TGCTGGAAGC CACCGCTCGG
GAGCTGATGG ACCGCTTTGC GGACCACGAA CCGCTCGTGA AGGCGCTTCA GCCCATCCAG
GACATCGGCC TCGGCTACCT GCGGCTGGGA CAGCCGCTCA GCACCCTCTC GGGAGGTGAG
GCGCAGCGGC TGAAGCTGGT CCACTTCCTG GCGGCCGGTC GCCCGTCGTC AAACGGGCGG
CACAGGTTGT TCATCCTCGA TGAGCCCACC ACGGGGCTCC ATCCCCACGA CCTTCAAAAA
CTAGTGGTCG TACTCCGGAG GCTGGTCGAC CTGGGGCATT CGGTGCTGGT GGTGGAGCAC
AACCTGGACT TCCTCAAATC CTGCGACTGG CTGATCGATC TCGGCCCGGG AGGCGGCGAG
CACGGCGGCG AAGTGGTGGC GACGGGGCCG CCGGAAGCGG TGGCCGCCCA TCCCGAAAGC
TGCACCGGCC GATTCCTGCG GGAGAAGCTC GAAGGCGCCC TGGGAGCGCG GGCCGAGGCC
GCGCCCTTCG ATCCGGGCGA AGACGGGGCT GCCGGCTCGC CTTCCCGCGA GATCGTGATT
CGTGGGGCGC GCGAGCACAA CCTGCAGGTG GACGAGATCC GGCTGCCGCG AAACGAGATG
ATCGTGCTGA CGGGGTTGAG CGGCTCCGGA AAGTCGTCGC TCGCCTTCGA CGTACTGTTC
GCCGAAGGGC AGCGCCGATA CCTGGAGTGC CTGTCGGCCT ACGTCCGGCA GTATTTCAAG
ATCATGGAAA AGCCCGACGT CGAACAGATC CTGGGGCTGC CGCCCACCAT CGCCATCGAG
CAGCGCACCA GCCGCCTGAA CCGGCGGTCC ACCGTGGCGA CGATCACCGA GATATACCAT
TTTCTGCGCC TGCTTTATTC GAAGCTCGGG CGCCAGCACT GCCCGGACTG CGGCCGCGAG
CTGGCCTCAC TCACCTACGA TCAGATCTTG TCCATGGTCG AGGCCGAAGC CCGGAAGGGC
AACAACCTCC TGCTGGCACC GCTGGTCCGA GGACGCAAGG GCATCTACCG GGACCTGTTC
ATGCGGCTGC GGAAAATGGG CTTCGAAAAG GTGCGGGTGG ACGGGCAATG GATGCCGCTC
GATCCGGTGC CTGAAATCGC CCGGCACCGG GAACACGACA TCGAGGTGCT CGTTTCGGCG
GCGGGAACGA AAAAAGGTCC CCGTGCGACA CTGGCCGAAA GGGTGCGCCA GGCGCTGTCG
CTGGGGGCCG GGACCCTTCA CCTTGAAGGA AACGAATCCA GAGTTTACAG CCAACGCCTT
TATTGTCCCG CTTGCGAGAA GGGCCTTGCG CCCCTCGACC CTCGGCTCTT CTCGTTCAAC
AGCAGGCACG GAGCGTGTCC TTCCTGCACG GGGCTGGGAA CCGTGAGGCA ATTCAGCGTG
GAGCGGCTCC TGGGGCCGCC TGACATGCCC CTCAAGGACG GGCTCCTGGG GTTTCTGAGG
AGCCAGGTCT GGCCAAAAGG GCTGAAAACT GAAGGCAGGA AGCTGGAACG CTTCTGGATC
GACCGGCTGG GAATCGACCC GGGCAGGCCG TGGCGGGAGT TGCCCGAAGA TGCAAGGGAA
GCGATGCTGC ACGGGCGTGG CAGAGGCGCC CCCGGCCTGC TCGCGGTGCT CGAGCGGGTG
AAGGAGGAAG ATTCCGCGTG GAGCAGCCTC GAGCCGTTCC ACGACGATGT GGTCTGCCCG
GAGTGCGGCG GGCGGCGCCT CAACCGGCAG GCCCGCTCCG TCGCGGTCCA GGGGCTGGGC
ATCGGAGACC TGACGTCTCT TGCGATTTCC GATTTCCTCC GGAAATGGAA GCGTTTCCGG
TTCGATCCCA AGGACCGGCC CATCGTTGCA CCAATCTCCA GGGAGGTCGC CGAACGTGTG
TCCTTTTTGC AGAAGGTGGG CCTCGACTAC CTCGCTCTCG ACCGCGCGGG CGACACCCTC
TCCGGCGGCG AAACGCAACG CATACGCCTT GCCGCGCAGC TTGGGTCGAA CCTGCGAGGC
GTCTGCTATG TGCTCGACGA GCCCACCATC GGACTCCACC CGGTGGACAA CGGCAGGCTG
CTGGAAAGTC TCGCGCGATT GAAGGAAAAA GGGAACACGA TACTCGTGGT CGAACACGAC
GCCGATACCA TGCGGCAGGC CGATACCCTT GTGGAGCTGG GACCGGAAGC GGGAAGAGGC
GGGGGGCGGC TCACCGCGCA GGGAAGCTTC GAGGCCCTGT GCGGGGATGC GCGCACTCTC
ACCGGGGCGT GGTTCTCTCG GTCCCTGGAC GACCTCTACC TGGCGTCGGA CCGGAAAACG
CCCGGGGAGT CCGGGTGGTT GGAAATCAAG GGCGCCTCTG CGCGGAACCT GAAGAAAATC
GACGTTCGCG TTCCGCTCGG CGCGCTCACC GTTGTCACCG GGGTCTCCGG GGCCGGGAAG
AGCACGCTCG TGCACGAAGT GGTCTACCGC GGGCTGCGCG AGAGGCTCGG GGGCAGGTAC
AAGGTGCGGG CTCCGGCGGA GCTCGAAAGC ATGTCCGGGC ACGATGCCGT GCAACGCGTG
CTGGAAGTCG ACCACAACCC CATCGGTCGC ACCCCTCGCT CCACCCCCGC AACGTACGTG
GGAATCTGGG ACGAAATCCG CAAGATCTTC GCCATGCTTC CGGAATCCCG GGCCCGGGGC
TTCAACCCGG GGCGGTTTTC GTATAACGTC AAGGGCGGTC GGTGCGAGTC GTGCAAAGGG
CAGGGGGAGA TCAGGGTGGA AATGAGCTTT CTGCCGGATG TCTCGGTGCC GTGCGAGACG
TGCGGCGGCT CGCGTTTCAA CACGGAAACC TTGGCTGCCC GTTACAAGGG AAAAAGCATC
GCCGACGTGT TGAAAATGAC CATCGACGAA GCCGCGGAGC TGTTCGATGC CTACCCCAGG
GTCGCCAAGC CGCTCCGGGT GTTGACCGAT TTGGGGCTGG GGTACCTCGC CATCGGCCAG
TCGAGCCCGA CCCTGTCGGG TGGCGAGGCC CAGAGGATCA AGCTGGCGAG CGAACTGGGA
AACAACCGGA CCCACACCCT CTACGTTCTG GACGAGCCCA CCACGGGCCT GCACCGCGCG
GACGTGAAAA AGCTGGTCGA TGTGCTTCGT GCCCTCAGCG CTCACGGTCA CACCGTGCTC
GTCATCGAGC ACAACATGGA CTTCGTCTGG GCCGCCGACT ATGTCATCGA TATCGGTCCC
GGCAGTGGAG CGAAAGGAGG ACGAGTCGTG GCGAAGGGCG CCCCTGCCGA GCTCCTCGCT
CAGGGGGAAC GCTCCGCCAC GGCGCGGGCA CTTGTCGACC ACTACGGGAT CGAAGGCAAG
GGGTGTGCGC AGCAGGAAGT ACGACGGGGG AGCAGGGGAA CCGGATGA
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| Protein sequence | MPKKSSPNGN EPLIRLRGVR QHNLKNIDLD LPLNKLIAVS GLSGSGKSSL ALHTLYAEGQ
RRYVETFSPY ARQFLERMDP PEADLIEGIP PGIAIESGTA VRSSRSTVGT ITEINDHLKL
LYARLAVLHC PECDRPVARD TPESVYRSLQ ELPDRSRVLI AFPFLPDNSG DWVRSLVASG
FLRLYVGGRT VELEEIGDAA SEYGRGEVLV VVDRLSWGSA ARERVADSLA TAFHAGNGHA
AVVVLPDTVK RFSSDLSCAD CNPGLSFSPP TPNLFSFNSP LGACPECRGF GRTIGVDLDL
VIPDRRLTLR RGAIKPFGTD RMETEDLMRF CAGEGIPVDV PFEDLDEKDR EKIINGTKDY
YGIKGYFEWL EGKTYKMHVR VFLSRYRAYT RCRSCAGTRY RPETLLYRLH GETIGALSAW
SIEKCAEFFS GGWPELARDP AAELLVKEVR SRLEFLRAVG LEYLSLDRQS RTLSGGEVQR
VHLTRALGSA MVNVLYVLDE PSVGLHARDQ KRLMGQLRRL VDIGNTVVVV EHDPDMIRFC
DLVVDMGPEG GEKGGEIVYR GTPEGMKREK RSLTGGYLSG RLEVGCELRR RRRPENGRSL
VLRGARENNL KNVTVEFPLG ILVGVSGVSG SGKSTLVEKS LYYNWLRKMG RATEAPGALD
AMEGAEWIEE VVLVDQQAIG RTPRANLLTY SRAIDPIRKL LAQTPEAVAR GYPASHFSFN
VPGGRCELCK GEGFERVEMQ FLADVLIRCP QCNGLRFKDE ILEVRARGLS IGDMLEATAR
ELMDRFADHE PLVKALQPIQ DIGLGYLRLG QPLSTLSGGE AQRLKLVHFL AAGRPSSNGR
HRLFILDEPT TGLHPHDLQK LVVVLRRLVD LGHSVLVVEH NLDFLKSCDW LIDLGPGGGE
HGGEVVATGP PEAVAAHPES CTGRFLREKL EGALGARAEA APFDPGEDGA AGSPSREIVI
RGAREHNLQV DEIRLPRNEM IVLTGLSGSG KSSLAFDVLF AEGQRRYLEC LSAYVRQYFK
IMEKPDVEQI LGLPPTIAIE QRTSRLNRRS TVATITEIYH FLRLLYSKLG RQHCPDCGRE
LASLTYDQIL SMVEAEARKG NNLLLAPLVR GRKGIYRDLF MRLRKMGFEK VRVDGQWMPL
DPVPEIARHR EHDIEVLVSA AGTKKGPRAT LAERVRQALS LGAGTLHLEG NESRVYSQRL
YCPACEKGLA PLDPRLFSFN SRHGACPSCT GLGTVRQFSV ERLLGPPDMP LKDGLLGFLR
SQVWPKGLKT EGRKLERFWI DRLGIDPGRP WRELPEDARE AMLHGRGRGA PGLLAVLERV
KEEDSAWSSL EPFHDDVVCP ECGGRRLNRQ ARSVAVQGLG IGDLTSLAIS DFLRKWKRFR
FDPKDRPIVA PISREVAERV SFLQKVGLDY LALDRAGDTL SGGETQRIRL AAQLGSNLRG
VCYVLDEPTI GLHPVDNGRL LESLARLKEK GNTILVVEHD ADTMRQADTL VELGPEAGRG
GGRLTAQGSF EALCGDARTL TGAWFSRSLD DLYLASDRKT PGESGWLEIK GASARNLKKI
DVRVPLGALT VVTGVSGAGK STLVHEVVYR GLRERLGGRY KVRAPAELES MSGHDAVQRV
LEVDHNPIGR TPRSTPATYV GIWDEIRKIF AMLPESRARG FNPGRFSYNV KGGRCESCKG
QGEIRVEMSF LPDVSVPCET CGGSRFNTET LAARYKGKSI ADVLKMTIDE AAELFDAYPR
VAKPLRVLTD LGLGYLAIGQ SSPTLSGGEA QRIKLASELG NNRTHTLYVL DEPTTGLHRA
DVKKLVDVLR ALSAHGHTVL VIEHNMDFVW AADYVIDIGP GSGAKGGRVV AKGAPAELLA
QGERSATARA LVDHYGIEGK GCAQQEVRRG SRGTG
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