| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0730 |
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| Symbol | |
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| ID | 4460796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 888744 |
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| End bp | 891413 |
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| Gene Length | 2670 bp |
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| Protein Length | 889 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639701492 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_844863 |
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| Protein GI | 116748176 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.687248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAA TCACCCCCAT GATGCAGCAA TATCTCGAAA TCAAGGAGAA GTATCCGGAC
GCGCTGCTGC TGTACCGGAT GGGGGATTTC TACGAGATGT TCATGGACGA TGCGGTGACG
GCATCTGGGC TCCTCGAGAT CGCGCTCACC TCCCGCGACC GGCAGTCGGA AGTCAGGATT
CCCATGTGCG GCGTTCCCTA TCACGCCGCC GAGGGGTACA TCGCCAGGCT CGTCTCGGCC
GGGAAAAAGG TGGCCATCTG CGACCAGGTG GAGGATCCCA GGAAGGCGAA GGGGCTGGTG
CGCAGGGAAG TCACGCGGGT GATCACTCCC GGGCTGGTCC TGGACGCGCA GAACCTCGCC
GCCAAGCAGC CCAATTACCT TGCCGCGGTC TCGAATTCCA CGGCGGGCGA ACGTTTCGGG
CTCGCCTTCC TGGACGTCTC CACGGCCGAA TTCAAGATGG TCGAGATTGA ATCCCGCGAA
GCCCTCCTGG AGGAGCTGAT CCGGGTCTCG CCCCGCGAAC TGCTCCTCTC CGATGACGAC
GAACATCCAT GGGCCGAGGA GCTCCCGAAG CTTTACGGAA TCGCCCTCAC CCCCCTGGGT
GCGGACAGAT TCGACGGCAA GCGCGCCGAG GAAGCCCTGG TCGGCCACTT TCGGGTCCAT
TCCCTCGAGG GATTCGGCAT TTCGGGGATG GACCTCGGAA TCCGGGCGGC GGGGGCCATC
CTTGCTTACA TGCAGGCGAA TCTCCTCGGG TCGTGCGATC ACATCACGCG GCTTCTCCCA
TACAGCCGCG GCGACTTCAT GATCGTGGAC GAAGCCGGCG TCCGCAACCT CGAGATATTC
CACTCCCAGA GCTTCCAGGG CCGCAAGGGC TCGCTCATTG ACATCCTGGA CGAAACCAAA
ACCGCCATGG GCGGGCGCAA GCTTCAGCAG TGGCTGCGGT ATCCCCTGCT CGATCTCGCG
CGCATCAACA ACCGCCGGGA GGCGATCGCC GAACTGGCGG CGAACGCGCC CATGCGCGGC
GAAACCCTGG GCCTGCTCAG CCGGATAAGC GACGTGGAAC GCCTCAACGG CCGCAACAGC
ACGGGGACTT CGACGCCGCG GGACCTGGTG GCCCTCAAGA AGTCCCTGCA GAACCTCCCC
GCCCTCGGCG CGGCGCTTGC CGAGCTCACC TCCCCAAGGC TCTCCGAGCT TCGAGCCCGC
TGGGACGATC TCGCGGACGT CGCCGACATC ATCGAGCGGA CCCTCCTCGA TCCCCCTCCA
CCGGGACTTG CCGCCGGGGG CGTCATTTCC GCCGGCGTCA GCGAAGAGCT CGACCATTTC
GTGCGGCTGA GCCGCGACGC CAAGGGGTGG ATGGCGGACT ACGAGGTCCA GCAGCGCCGG
GATACGGGCA TTTCCTCGCT CAAGGTCCGC TACAACAAGG TGTTCGGTTA TTACATCGAG
ATTTCGAACG CGAACCTCAA CTCCGTCCCT GAACACTATT TTCGCAAGCA AACGCTGGTG
AATGCGGAAC GATTCATCAC CGAGGAGCTC AAGACCTTCG AAACTCAGGT GCTCCAAGCC
GAGGAGAAGC GGCTCGAGCT CGAGCAGCAG ATCTTCGCGG ATCTGCGCGC CCGGATCGCG
CGGGAGGCCG GGCGCATCCA GGCCGCGGCC GACCGGATCG CCGACCTCGA TTGCGTGTCC
GCCCTGGCCG AGGTTGCGTG CCGCTACGAC TACTGCCGCC CGGTGATGGA CGAGTCCGAC
GCGATCCGCA TTCGCGACGG CCGTCACCCG GTGATCGAGC ATTACCTCAA AGACGGGACC
TTCGTTCCCA ACGACCTGGA CATGGATCAG CGGGATCAGC AGGTGCTCGT CATAACCGGG
CCCAACATGG CCGGAAAATC GACCATTCTC CGGCAGGCCG CCCTTATCGT CCTCATGGGA
CACATCGGGA GTTTCGTCCC GGCATCGGAA GCGCACATCG GCCTGGTGGA CCGCATATTC
ACCCGTGTGG GCGCATCCGA CGACCTGGCC CGCGGGCGTT CCACCTTCAT GGTGGAGATG
CAGGAAACCG CCAACATTCT CCATCACGCC ACACCGCGCA GCCTTATCAT TCTCGACGAG
ATCGGCCGCG GCACGAGCAC CTACGACGGG CTGAGCATCG CCTGGGCGGT TGCCGAACAT
TTGCACGACT TCCAGGAAAA GGGTATAAAG ACGCTTTTTG CAACGCATTA TCATGAACTG
ACGGAGTTGG CCCGCAGTCG TCCGAGGGTC AGGAATTTCA ACGTGGCCAT CCGGGAATGG
CAGCAGGAGA TCCTGTTCTT TCACAAGCTG GTCCAGGGTG GAGCGAGCCG CAGCTACGGA
ATCCAGGTGG CGCGACTGGC GGGCTTGCCG GAGGAAGTGA CCGGGCGCGC AAGGGAAATC
CTCCAGCAGC TCGAATCCGG TCATGCGCCG TTTGCGGCCG CGCCGTCCGG CGCGGCCAGG
CGCGGCCGCC CGGCGCGCGA GAAGGAACCC GGCATCCAGA TGAGCCTCTT TCAGCGTTCG
CCGGAATGGC TCCGGGATCG CATTTTGGCC CTCGACCTGG ACAACATGAC ACCGATTGCC
GCGCTGCAGA ACCTTCATGC ACTGAAAGAG CAGATACGGG GCTCCGCCGG GGAAGAACCG
GCAAGCTGCG CTTCCAGGGG AAAGCGATGA
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| Protein sequence | MNKITPMMQQ YLEIKEKYPD ALLLYRMGDF YEMFMDDAVT ASGLLEIALT SRDRQSEVRI
PMCGVPYHAA EGYIARLVSA GKKVAICDQV EDPRKAKGLV RREVTRVITP GLVLDAQNLA
AKQPNYLAAV SNSTAGERFG LAFLDVSTAE FKMVEIESRE ALLEELIRVS PRELLLSDDD
EHPWAEELPK LYGIALTPLG ADRFDGKRAE EALVGHFRVH SLEGFGISGM DLGIRAAGAI
LAYMQANLLG SCDHITRLLP YSRGDFMIVD EAGVRNLEIF HSQSFQGRKG SLIDILDETK
TAMGGRKLQQ WLRYPLLDLA RINNRREAIA ELAANAPMRG ETLGLLSRIS DVERLNGRNS
TGTSTPRDLV ALKKSLQNLP ALGAALAELT SPRLSELRAR WDDLADVADI IERTLLDPPP
PGLAAGGVIS AGVSEELDHF VRLSRDAKGW MADYEVQQRR DTGISSLKVR YNKVFGYYIE
ISNANLNSVP EHYFRKQTLV NAERFITEEL KTFETQVLQA EEKRLELEQQ IFADLRARIA
REAGRIQAAA DRIADLDCVS ALAEVACRYD YCRPVMDESD AIRIRDGRHP VIEHYLKDGT
FVPNDLDMDQ RDQQVLVITG PNMAGKSTIL RQAALIVLMG HIGSFVPASE AHIGLVDRIF
TRVGASDDLA RGRSTFMVEM QETANILHHA TPRSLIILDE IGRGTSTYDG LSIAWAVAEH
LHDFQEKGIK TLFATHYHEL TELARSRPRV RNFNVAIREW QQEILFFHKL VQGGASRSYG
IQVARLAGLP EEVTGRAREI LQQLESGHAP FAAAPSGAAR RGRPAREKEP GIQMSLFQRS
PEWLRDRILA LDLDNMTPIA ALQNLHALKE QIRGSAGEEP ASCASRGKR
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