Gene Sfum_0724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0724 
Symbol 
ID4460790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp880703 
End bp881641 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content60% 
IMG OID639701486 
Productpeptide chain release factor 2 
Protein accessionYP_844857 
Protein GI116748170 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGTGG AGAATTGGCA GCGCCTGTCG GAGGAGCTAC GGGACAACGA GCTCATGCTC 
GAAATGGCGC TCGAAGAGGA AGATCGGGAA GTCCTCAAGG ATGTCCATCG CAAGGCGTTG
AGCCTTCAGA AGGAGCTGCG GACGGTCGAG CTGCAGCAGT TGCTCGGCGA GGAAAACGAC
GACAAGAATG CTATCGTGAG CATCAATGCC GGCGCCGGAG GCACCGAAGC CCAGGACTGG
GCCGAGATGC TGCTGCGGAT GTACCTGCGG TGGTGTGAGA AGAAGAGCTT CACTGTCCAG
ATGGTCGATA TGCTCGAAGG TGAAGAGGCG GGAATCAAGA GCGGTACGTT TACCGTGTCG
GGCTCCCATG CCTACGGCCT GCTCAAGGGG GAATCCGGCA TCCATCGCCT CGTGCGGATT
TCCCCTTTCG ATGCGAGCGG CCGGAGGCAC ACTTCCTTCG CGGCGGTGCT GGTCATTCCC
GAGGTGGACG AGAAGATCGA GGTCGAAATC AAGCAGGCGG ATTTGAGGAT CGACACTTAC
CGCGCAAGCG GCGCCGGCGG CCAGCACGTG AACAAGACCA GCTCGGCGGT CCGGATCACG
CATCTCCCCA CGGGGATCGT GGTGCAGTGC CAGAATGAAA AATCACAGCA CAGAAATCGC
GACATTGCGC TGAAGATACT ACGGGCAAGG CTCTACGAGC GCGAAAAGAG GGCTCAGCAG
GAAAAGCTCC AGGAAGCTCA CGACAGTCTC GACGACATCG CCTGGGGCAA TCAGATCCGC
TCCTACGTGC TGCAACCCTA CCGGTTGATC AAGGACCACC GGACAAGCAT CGAGAAGGGC
AACGTCGAGG GCGTTCTGGA CGGCGAAATC GACGATTTCA TTGAAGGCTA CCTGATGAAC
CTGGCGAATG CCAGGGGCCG TGCGGCCGTC ACGGCCTGA
 
Protein sequence
MIVENWQRLS EELRDNELML EMALEEEDRE VLKDVHRKAL SLQKELRTVE LQQLLGEEND 
DKNAIVSINA GAGGTEAQDW AEMLLRMYLR WCEKKSFTVQ MVDMLEGEEA GIKSGTFTVS
GSHAYGLLKG ESGIHRLVRI SPFDASGRRH TSFAAVLVIP EVDEKIEVEI KQADLRIDTY
RASGAGGQHV NKTSSAVRIT HLPTGIVVQC QNEKSQHRNR DIALKILRAR LYEREKRAQQ
EKLQEAHDSL DDIAWGNQIR SYVLQPYRLI KDHRTSIEKG NVEGVLDGEI DDFIEGYLMN
LANARGRAAV TA