Gene Sfum_0721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0721 
Symbol 
ID4460787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp876930 
End bp877853 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content63% 
IMG OID639701483 
Productputative agmatinase 
Protein accessionYP_844854 
Protein GI116748167 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family 
TIGRFAM ID[TIGR01230] agmatinase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCCG AAAAATCGGT GGGGTCCGGG CTGAGGGAAT GCCTGGGACC CCATTGTTCA 
TTTTTGGGCC TTGCCGTTCC CGAGTGTGCG TTCGAGAATG CCGGAGCGGT CATCATCCCG
GTGCCTTACG ACGCCACGAC GACTTATCGG GCGGGGACGC GTGAAGGGCC GCGAGCCATT
CTGGCCGCGT CCAGGGAACT CGAACCCTAC GACGAGGAAA CGTGCACCGA GGCCTATCGG
CACGGGATCG CCACCCTGGA GGAATTGCCG GTGGTGGTGA GCTCCCCGCG CGATATGCTG
GACAGCGTGC GGGTTGTGGG GGCGCAAGTC CTTCGCTCGG GAAAGCTGCC CGTGCTGCTC
GGCGGCGAGC ACCTGCTGTC GCTGGGCATG ATCGAGGCGG CGGCCGATCA CTTCGGGGAT
TTGAGCATTC TCCACCTTGA TGCCCACGCG GACCTGCGGG AGCAATACCA GGGCAGTCCC
TACAGCAACG CCTGCATCAT GCGGCACGGC GCGGCGTTGG CTCCCGTGGT GCAGGTCGGG
ATACGATCGC TGACCGCCGA AGAACATGAG TTCATCCGGG CAAAGAAGAT CCCCTGCTTC
TTTGCGCATG ACCTCCACCG GGATCCGTCG CTGTACGCTC GTGTCATCCC GTGCCTCGGA
AAGCGGGTTT ATCTCAGCAT CGATCTGGAC GTCTTCGACC CGGCGGTGAT GCCGTCGGTG
GGTACACCCG AACCGGGCGG TCTGTCGTGG TATGAAGTGA TCGACCTGCT CAGGGCCGTC
TTCCGGGAAC GGCAGGTGGT CGGATTCGAT GTGATGGAGC TGCTGCCGGT GCCCTGTTTT
GCCGCTCCGG ATTTCCTGGC CGCCCGCTTG GTGTACAAGC TGCTTTCGTT CTTTTTTGCG
GGTGCCGCTC GTCCGCCTTG CTAA
 
Protein sequence
MTSEKSVGSG LRECLGPHCS FLGLAVPECA FENAGAVIIP VPYDATTTYR AGTREGPRAI 
LAASRELEPY DEETCTEAYR HGIATLEELP VVVSSPRDML DSVRVVGAQV LRSGKLPVLL
GGEHLLSLGM IEAAADHFGD LSILHLDAHA DLREQYQGSP YSNACIMRHG AALAPVVQVG
IRSLTAEEHE FIRAKKIPCF FAHDLHRDPS LYARVIPCLG KRVYLSIDLD VFDPAVMPSV
GTPEPGGLSW YEVIDLLRAV FRERQVVGFD VMELLPVPCF AAPDFLAARL VYKLLSFFFA
GAARPPC