Gene Sfum_0717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0717 
Symbol 
ID4461279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp873044 
End bp873922 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content62% 
IMG OID639701479 
Productradical SAM domain-containing protein 
Protein accessionYP_844850 
Protein GI116748163 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGGA TGCACTACGA AGGAACGATC ATCCGGCCGC CCAGCGAGGC GGACAGCGTT 
CTGCTGCAGG TCACGGTCGG CTGTTCGCAC AACAAGTGCA CGTTCTGCGG CACGTATAAA
GGGGAACGGT TCAGGATCAA GGACGACGCC ACGATCGATG CGGACATCCG GTACGCGGCC
GGGAACCTTT CCTTTCTGCA CCGGGTGTTC CTGGTCGACG GAGATGCCCT TATCATTCCC
CAGGACCGGC TGGTCCGGAT CATGCGCCGA ATCCGGGAAG AGATGCCCTG GATCAGAAGG
GTCGGCCTGT ACGGCAATGC CAAGAGCATC CTGCGAAAGA CGCCCGAACA ACTTGCCGAG
CTCCGGGAGC TTGGGCTGGG CATTGTGTAC CAGGGGCTGG AAAGCGGTGA CGAACAGGTC
CTGAGGGAAA TCAACAAGGG CGTTTCCCTC GACCGGATGA TCCAGTCCGC CAGGAGAGTG
CGCGAGGCCG GGATCAAACT GTCGGTCATG GCGATCCTGG GACTGGCGGG GCGTGAGCGC
TCCCTGGTCC ACGCGCGGGC CACCGGTGAG GCGCTGACGG CGATGGACCC CAACTACGTG
GGCGTTCTGA CCCTCATGGT GCTGCCCAAC ACCGAGCTCT ACGCCCGAAT TCAAAGGGGG
GAGTTCGAGC TGCTTTCGTC GCGCGAGATG CTCGAAGAAC TGCGGGAAAT CCTGCGGCAT
ACGACCATGA CCAGGGGACT CTTCTTCGCA AACCACGCGT CCAATTACCT TCCCTTGAAA
GTGAGAATGC CGGGCGAAAA GGAGCGGGCG CTCAAGACCA TCGACGATGC GCTCCAGGGG
GGCATCCACC TGAGGCCTGA ATGGATGCGG GGCCTGTAG
 
Protein sequence
MDGMHYEGTI IRPPSEADSV LLQVTVGCSH NKCTFCGTYK GERFRIKDDA TIDADIRYAA 
GNLSFLHRVF LVDGDALIIP QDRLVRIMRR IREEMPWIRR VGLYGNAKSI LRKTPEQLAE
LRELGLGIVY QGLESGDEQV LREINKGVSL DRMIQSARRV REAGIKLSVM AILGLAGRER
SLVHARATGE ALTAMDPNYV GVLTLMVLPN TELYARIQRG EFELLSSREM LEELREILRH
TTMTRGLFFA NHASNYLPLK VRMPGEKERA LKTIDDALQG GIHLRPEWMR GL